RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 VWA3BQ502W6 1294 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 WWC2Q6AWC2 1192 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 FRMD5Q7Z6J6 570 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 B3GNT8Q7Z7M8 397 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 SAPCD2Q86UD0 394 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 ZNF513Q8N8E2 541 aaPredicted RBP5.46□□□□□ -1.54
VPS36-205ENST00000492650 SMARCC2Q8TAQ2 1214 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 ZNF526Q8TF50 670 aaPredicted RBP5.46□□□□□ -1.54
VPS36-205ENST00000492650 TEPSINQ96N21 525 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 SPATA25Q9BR10 227 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 KRTAP4-5Q9BYR2 181 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 USP40Q9NVE5 1235 aa5.46□□□□□ -1.54
VPS36-205ENST00000492650 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS36-205ENST00000492650 ZNF143P52747 638 aaPredicted RBP5.45□□□□□ -1.54
VPS36-205ENST00000492650 NT5DC1Q5TFE4 455 aa5.45□□□□□ -1.54
VPS36-205ENST00000492650 LIPIQ6XZB0 460 aa5.45□□□□□ -1.54
VPS36-205ENST00000492650 PRRT2Q7Z6L0 340 aaPredicted RBP5.45□□□□□ -1.54
VPS36-205ENST00000492650 COPS5Q92905 334 aa5.45□□□□□ -1.54
VPS36-205ENST00000492650 MARCH2Q9P0N8 246 aa5.45□□□□□ -1.54
VPS36-205ENST00000492650 SIT1Q9Y3P8 196 aa5.45□□□□□ -1.54
VPS36-205ENST00000492650 MRVI1Q9Y6F6 885 aa5.45□□□□□ -1.54
VPS36-205ENST00000492650 THBDP07204 575 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
VPS36-205ENST00000492650 HTRA3P83110 453 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 RBM10P98175 930 aaKnown RBP5.44□□□□□ -1.54
VPS36-205ENST00000492650 PLP2Q04941 152 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 CACNB2Q08289 660 aaPredicted RBP5.44□□□□□ -1.54
VPS36-205ENST00000492650 SKOR2Q2VWA4 1001 aaPredicted RBP5.44□□□□□ -1.54
VPS36-205ENST00000492650 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 GTF2IRD2BQ6EKJ0 949 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 GTF2IRD2Q86UP8 949 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 VPS37DQ86XT2 251 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 NOX5Q96PH1 765 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 MMP19Q99542 508 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 LGR4Q9BXB1 951 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 AP5M1Q9H0R1 490 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 CAPN10Q9HC96 672 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 CYP26B1Q9NR63 512 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 LRP2BPQ9P2M1 347 aa5.44□□□□□ -1.54
VPS36-205ENST00000492650 SH3D21A4FU49 640 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 SMAD7O15105 426 aaKnown RBP5.43□□□□□ -1.54
VPS36-205ENST00000492650 SSBP05455 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS36-205ENST00000492650 SV2CQ496J9 727 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 LARP1BQ659C4 914 aaKnown RBP5.43□□□□□ -1.54
VPS36-205ENST00000492650 MBLAC2Q68D91 279 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 DCP2Q8IU60 420 aaKnown RBP5.43□□□□□ -1.54
VPS36-205ENST00000492650 TEX2Q8IWB9 1127 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 TRIM59Q8IWR1 403 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 CARFQ8N187 725 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 PLEKHO2Q8TD55 490 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 CPA5Q8WXQ8 436 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 DPF3Q92784 378 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 ZBTB8AQ96BR9 441 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 DDX11Q96FC9 970 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 BDH2Q9BUT1 245 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 NKX2-4Q9H2Z4 354 aa5.43□□□□□ -1.54
VPS36-205ENST00000492650 C22orf46C9J442 243 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 PRICKLE3O43900 615 aaPredicted RBP5.42□□□□□ -1.54
VPS36-205ENST00000492650 CYP2C8P10632 490 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 SMAD4Q13485 552 aaKnown RBP5.42□□□□□ -1.54
VPS36-205ENST00000492650 RTP5Q14D33 572 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 INF2Q27J81 1249 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 UBXN11Q5T124 520 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 C6orf15Q6UXA7 325 aaPredicted RBP5.42□□□□□ -1.54
VPS36-205ENST00000492650 TTLL7Q6ZT98 887 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 FERMT3Q86UX7 667 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 MRGPRX3Q96LB0 322 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 ACTR10Q9NZ32 417 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 NTMQ9P121 344 aa5.42□□□□□ -1.54
VPS36-205ENST00000492650 SMARCA5O60264 1052 aaPredicted RBP5.41□□□□□ -1.54
VPS36-205ENST00000492650 SNRPB2P08579 225 aaKnown RBP5.41□□□□□ -1.54
VPS36-205ENST00000492650 ERCC5P28715 1186 aaPredicted RBP5.41□□□□□ -1.54
VPS36-205ENST00000492650 ECI1P42126 302 aa5.41□□□□□ -1.54
VPS36-205ENST00000492650 SARSP49591 514 aaKnown RBP5.41□□□□□ -1.54
VPS36-205ENST00000492650 GJA9P57773 515 aa5.41□□□□□ -1.54
VPS36-205ENST00000492650 DLX2Q07687 328 aaPredicted RBP5.41□□□□□ -1.54
VPS36-205ENST00000492650 IQCEQ6IPM2 695 aa5.41□□□□□ -1.54
VPS36-205ENST00000492650 FAM178BQ8IXR5 827 aa5.41□□□□□ -1.54
VPS36-205ENST00000492650 FRS2Q8WU20 508 aa5.41□□□□□ -1.54
VPS36-205ENST00000492650 BTN2A2Q8WVV5 523 aa5.41□□□□□ -1.54
VPS36-205ENST00000492650 DDX1Q92499 740 aaKnown RBP5.41□□□□□ -1.54
VPS36-205ENST00000492650 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
VPS36-205ENST00000492650 TIMM13Q9Y5L4 95 aaPredicted RBP5.41□□□□□ -1.54
VPS36-205ENST00000492650 SGSM2O43147 1006 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 DDAH1O94760 285 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 ITGAVP06756 1048 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 HOXC12P31275 282 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 KCNJ6P48051 423 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 RPL11P62913 178 aaKnown RBP5.4□□□□□ -1.54
VPS36-205ENST00000492650 TNNI3KQ59H18 835 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 ZFYVE27Q5T4F4 411 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 CD300LDQ6UXZ3 194 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 ETV3LQ6ZN32 361 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 CEP68Q76N32 757 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 NPM2Q86SE8 214 aaKnown RBP5.4□□□□□ -1.54
VPS36-205ENST00000492650 NPLOC4Q8TAT6 608 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 SEC14L1Q92503 715 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 DIO2Q92813 273 aa5.4□□□□□ -1.54
VPS36-205ENST00000492650 TRMT2BQ96GJ1 504 aaKnown RBP5.4□□□□□ -1.54
VPS36-205ENST00000492650 SPATA6Q9NWH7 488 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms