RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 HMX1Q9NP08 348 aaPredicted RBP18.32■□□□□ 0.52
HDAC7-224ENST00000488927 PXMP2Q9NR77 195 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 VPS54Q9P1Q0 977 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 COL20A1Q9P218 1284 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 KIF3AQ9Y496 699 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
HDAC7-224ENST00000488927 ASTN1O14525 1302 aa18.31■□□□□ 0.52
HDAC7-224ENST00000488927 HTTP42858 3142 aa18.31■□□□□ 0.52
HDAC7-224ENST00000488927 JAK2O60674 1132 aa18.31■□□□□ 0.52
HDAC7-224ENST00000488927 FDPSP14324 419 aaKnown RBP18.31■□□□□ 0.52
HDAC7-224ENST00000488927 EDNRBP24530 442 aa18.31■□□□□ 0.52
HDAC7-224ENST00000488927 CACNB2Q08289 660 aaPredicted RBP18.31■□□□□ 0.52
HDAC7-224ENST00000488927 PDE4DQ08499 809 aa18.31■□□□□ 0.52
HDAC7-224ENST00000488927 AP3B2Q13367 1082 aa18.31■□□□□ 0.52
HDAC7-224ENST00000488927 USP17L6PQ6QN14 398 aa18.31■□□□□ 0.52
HDAC7-224ENST00000488927 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
HDAC7-224ENST00000488927 ALG1Q9BT22 464 aa18.31■□□□□ 0.52
HDAC7-224ENST00000488927 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.31■□□□□ 0.52
HDAC7-224ENST00000488927 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
HDAC7-224ENST00000488927 CYBAP13498 195 aa18.3■□□□□ 0.52
HDAC7-224ENST00000488927 TRIM29Q14134 588 aa18.3■□□□□ 0.52
HDAC7-224ENST00000488927 XRRA1Q6P2D8 792 aa18.3■□□□□ 0.52
HDAC7-224ENST00000488927 HSCBQ8IWL3 235 aa18.3■□□□□ 0.52
HDAC7-224ENST00000488927 REXO1Q8N1G1 1221 aaKnown RBP18.3■□□□□ 0.52
HDAC7-224ENST00000488927 FAM184AQ8NB25 1140 aa18.3■□□□□ 0.52
HDAC7-224ENST00000488927 ABHD8Q96I13 439 aa18.3■□□□□ 0.52
HDAC7-224ENST00000488927 VTA1Q9NP79 307 aa18.3■□□□□ 0.52
HDAC7-224ENST00000488927 FRMPD4Q14CM0 1322 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 PLXNA1Q9UIW2 1896 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 MSCO60682 206 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 SNAI1O95863 264 aaPredicted RBP18.29■□□□□ 0.52
HDAC7-224ENST00000488927 CAPN2P17655 700 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 EIF2AK2P19525 551 aaKnown RBP18.29■□□□□ 0.52
HDAC7-224ENST00000488927 TRIM32Q13049 653 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 ACVR2BQ13705 512 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 STXBP2Q15833 593 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 UBE2SQ16763 222 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 DAGLBQ8NCG7 672 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 PDCD2LQ9BRP1 358 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 PCDHA4Q9UN74 947 aa18.29■□□□□ 0.52
HDAC7-224ENST00000488927 EIF3JO75822 258 aaKnown RBP18.28■□□□□ 0.52
HDAC7-224ENST00000488927 STAM2O75886 525 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 NR3C2P08235 984 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 CCL5P13501 91 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 CCND2P30279 289 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 CLK2P49760 499 aaKnown RBP18.28■□□□□ 0.52
HDAC7-224ENST00000488927 CUL4AQ13619 759 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 PGM5Q15124 567 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 AIFM3Q96NN9 605 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 PHF20Q9BVI0 1012 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 TMEM106CQ9BVX2 250 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■■■□ 24.8
HDAC7-224ENST00000488927 RNF208Q9H0X6 261 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 BRMS1Q9HCU9 246 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 ZHX1Q9UKY1 873 aaPredicted RBP18.28■□□□□ 0.52
HDAC7-224ENST00000488927 PCDHA6Q9UN73 950 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 PCDHA8Q9Y5H6 950 aa18.28■□□□□ 0.52
HDAC7-224ENST00000488927 SEPT4O43236 478 aa18.27■□□□□ 0.52
HDAC7-224ENST00000488927 ZNF865P0CJ78 1059 aaPredicted RBP18.27■□□□□ 0.52
HDAC7-224ENST00000488927 AKR1A1P14550 325 aa18.27■□□□□ 0.52
HDAC7-224ENST00000488927 VSIG10LQ86VR7 867 aa18.27■□□□□ 0.52
HDAC7-224ENST00000488927 BLIDQ8IZY5 108 aa18.27■□□□□ 0.52
HDAC7-224ENST00000488927 UNC93B1Q9H1C4 597 aa18.27■□□□□ 0.52
HDAC7-224ENST00000488927 PAK6Q9NQU5 681 aaPredicted RBP18.27■□□□□ 0.52
HDAC7-224ENST00000488927 FAM184BQ9ULE4 1060 aa18.27■□□□□ 0.52
HDAC7-224ENST00000488927 SMC3Q9UQE7 1217 aa18.27■□□□□ 0.52
HDAC7-224ENST00000488927 CNGA1P29973 690 aa18.26■□□□□ 0.51
HDAC7-224ENST00000488927 CCND3P30281 292 aaPredicted RBP18.26■□□□□ 0.51
HDAC7-224ENST00000488927 MTFR1Q15390 333 aa18.26■□□□□ 0.51
HDAC7-224ENST00000488927 PCNX4Q63HM2 1172 aa18.26■□□□□ 0.51
HDAC7-224ENST00000488927 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
HDAC7-224ENST00000488927 INTS4Q96HW7 963 aaKnown RBP18.26■□□□□ 0.51
HDAC7-224ENST00000488927 C8orf76Q96K31 380 aa18.26■□□□□ 0.51
HDAC7-224ENST00000488927 ANO3Q9BYT9 981 aa18.26■□□□□ 0.51
HDAC7-224ENST00000488927 KATNBL1Q9H079 304 aa18.26■□□□□ 0.51
HDAC7-224ENST00000488927 LCTP09848 1927 aa18.25■□□□□ 0.51
HDAC7-224ENST00000488927 GJB1P08034 283 aa18.25■□□□□ 0.51
HDAC7-224ENST00000488927 MYCLP12524 364 aaPredicted RBP18.25■□□□□ 0.51
HDAC7-224ENST00000488927 SAFBQ15424 915 aaKnown RBP eCLIP18.25■□□□□ 0.51
HDAC7-224ENST00000488927 PRAMEF19Q5SWL8 479 aa18.25■□□□□ 0.51
HDAC7-224ENST00000488927 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
HDAC7-224ENST00000488927 IQSEC1Q6DN90 963 aa18.25■□□□□ 0.51
HDAC7-224ENST00000488927 FBXO16Q8IX29 292 aaPredicted RBP18.25■□□□□ 0.51
HDAC7-224ENST00000488927 TRPV1Q8NER1 839 aa18.25■□□□□ 0.51
HDAC7-224ENST00000488927 DDX20Q9UHI6 824 aaKnown RBP18.25■□□□□ 0.51
HDAC7-224ENST00000488927 KCNJ14Q9UNX9 436 aa18.25■□□□□ 0.51
HDAC7-224ENST00000488927 MYCP01106 439 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-224ENST00000488927 KRT2P35908 639 aa18.24■□□□□ 0.51
HDAC7-224ENST00000488927 SREBF1P36956 1147 aa18.24■□□□□ 0.51
HDAC7-224ENST00000488927 CCDC144BQ3MJ40 725 aa18.24■□□□□ 0.51
HDAC7-224ENST00000488927 GNPTABQ3T906 1256 aa18.24■□□□□ 0.51
HDAC7-224ENST00000488927 KCNV1Q6PIU1 500 aa18.24■□□□□ 0.51
HDAC7-224ENST00000488927 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
HDAC7-224ENST00000488927 SCFD2Q8WU76 684 aa18.24■□□□□ 0.51
HDAC7-224ENST00000488927 RBM47A0AV96 593 aaKnown RBP18.23■□□□□ 0.51
HDAC7-224ENST00000488927 DTNBO60941 627 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 MMP1P03956 469 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 RARBP10826 455 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 GJB2P29033 226 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 TTLL4Q14679 1199 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms