RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 PDGFCQ9NRA1 345 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 GRIN2DO15399 1336 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 FRMPD2Q68DX3 1309 aaPredicted RBP10.05□□□□□ -0.8
PRKCB-208ENST00000487674 WDR19Q8NEZ3 1342 aa10.05□□□□□ -0.8
PRKCB-208ENST00000487674 DYNC1LI2O43237 492 aaPredicted RBP10.04□□□□□ -0.8
PRKCB-208ENST00000487674 ACRP10323 421 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 PTGS1P23219 599 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 CYP2C18P33260 490 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 ZNF543Q08ER8 600 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 AAMPQ13685 434 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 BAATQ14032 418 aaPredicted RBP10.04□□□□□ -0.8
PRKCB-208ENST00000487674 DUSP28Q4G0W2 176 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 AKNAD1Q5T1N1 836 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 SLC30A10Q6XR72 485 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 MFSD6Q6ZSS7 791 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 ZNF365Q70YC5 407 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 TBC1D10CQ8IV04 446 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 HERVK_113Q902F9 699 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 TTC14Q96N46 770 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 PURBQ96QR8 312 aaKnown RBP10.04□□□□□ -0.8
PRKCB-208ENST00000487674 NOC4LQ9BVI4 516 aaKnown RBP10.04□□□□□ -0.8
PRKCB-208ENST00000487674 PBX4Q9BYU1 374 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 RNF41Q9H4P4 317 aaPredicted RBP10.04□□□□□ -0.8
PRKCB-208ENST00000487674 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 GBF1Q92538 1859 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 TTC28Q96AY4 2481 aa10.04□□□□□ -0.8
PRKCB-208ENST00000487674 SCN10AQ9Y5Y9 1956 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 EYSQ5T1H1 3165 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 RBM47A0AV96 593 aaKnown RBP10.03□□□□□ -0.8
PRKCB-208ENST00000487674 PTPDC1A2A3K4 754 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 ARHGAP33O14559 1287 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 B4GALT4O60513 344 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 SNHG28P0DPA3 235 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 NT5C2P49902 561 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 CPT1AP50416 773 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 MFAP1P55081 439 aaKnown RBP10.03□□□□□ -0.8
PRKCB-208ENST00000487674 HAND2P61296 217 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 PSMC6P62333 389 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 RAB30Q15771 203 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 TMEM63BQ5T3F8 832 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 GPATCH4Q5T3I0 446 aaKnown RBP10.03□□□□□ -0.8
PRKCB-208ENST00000487674 ADGRD1Q6QNK2 874 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 RNF207Q6ZRF8 634 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 CLEC4DQ8WXI8 215 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 MPHOSPH6Q99547 160 aaKnown RBP10.03□□□□□ -0.8
PRKCB-208ENST00000487674 WDR11Q9BZH6 1224 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 TANC1Q9C0D5 1861 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 LNPKQ9C0E8 428 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 ALDH8A1Q9H2A2 487 aaPredicted RBP10.03□□□□□ -0.8
PRKCB-208ENST00000487674 POLR3EQ9NVU0 708 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 NEDD4P46934 1319 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 UMODL1Q5DID0 1318 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 RAD50Q92878 1312 aa10.03□□□□□ -0.8
PRKCB-208ENST00000487674 EDNRBP24530 442 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 CALML3P27482 149 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 PURAQ00577 322 aaKnown RBP10.02□□□□□ -0.81
PRKCB-208ENST00000487674 PDE4DQ08499 809 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 PPP2R5BQ15173 497 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 SMC5Q8IY18 1101 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 DNERQ8NFT8 737 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 OR6J1Q8NGC5 347 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 PTCD2Q8WV60 388 aaKnown RBP10.02□□□□□ -0.81
PRKCB-208ENST00000487674 BBXQ8WY36 941 aaPredicted RBP10.02□□□□□ -0.81
PRKCB-208ENST00000487674 ESR2Q92731 530 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 GAS2L1Q99501 681 aaPredicted RBP10.02□□□□□ -0.81
PRKCB-208ENST00000487674 TRPV6Q9H1D0 765 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 WNT8AQ9H1J5 351 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 MSRAQ9UJ68 235 aa10.02□□□□□ -0.81
PRKCB-208ENST00000487674 GRXCR1A8MXD5 290 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 B4DLN1 442 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 NKRFO15226 690 aaKnown RBP eCLIP10.01□□□□□ -0.81
PRKCB-208ENST00000487674 FGBP02675 491 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 PFKMP08237 780 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 SUPT20HL2P0C7V6 817 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 SDSP20132 328 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 MRPL12P52815 198 aaKnown RBP10.01□□□□□ -0.81
PRKCB-208ENST00000487674 CCL23P55773 120 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 RPS6P62753 249 aaKnown RBP10.01□□□□□ -0.81
PRKCB-208ENST00000487674 BRDTQ58F21 947 aaPredicted RBP10.01□□□□□ -0.81
PRKCB-208ENST00000487674 DGKHQ86XP1 1220 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 USP38Q8NB14 1042 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 SCFD2Q8WU76 684 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 RILPL2Q969X0 211 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 MTG1Q9BT17 334 aaPredicted RBP10.01□□□□□ -0.81
PRKCB-208ENST00000487674 MAF1Q9H063 256 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 OSBPL3Q9H4L5 887 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 CXXC1Q9P0U4 656 aaPredicted RBP10.01□□□□□ -0.81
PRKCB-208ENST00000487674 MYH6P13533 1939 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 TNKSO95271 1327 aa10.01□□□□□ -0.81
PRKCB-208ENST00000487674 VCANP13611 3396 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 MYO9BQ13459 2157 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 ZNF213O14771 459 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 KPNA6O60684 536 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 MYL3P08590 195 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 CCDC178Q5BJE1 867 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 OTOP2Q7RTS6 562 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 CHD1LQ86WJ1 897 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 IQCA1Q86XH1 822 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms