RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SP7Q8TDD2 431 aaPredicted RBP18.25■□□□□ 0.51
U2AF1-211ENST00000486519 AFAP1L1Q8TED9 768 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 TRERF1Q96PN7 1200 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 PRRX2Q99811 253 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 FEM1BQ9UK73 627 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 NOD1Q9Y239 953 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 RIF1Q5UIP0 2472 aaKnown RBP18.25■□□□□ 0.51
U2AF1-211ENST00000486519 ZBED9Q6R2W3 1325 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 IGKV6D-41A0A0C4DH26 115 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 ABHD14A-ACY1A0A1B0GW23 586 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 MED19A0JLT2 244 aaPredicted RBP18.24■□□□□ 0.51
U2AF1-211ENST00000486519 PRR23AA6NEV1 266 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 H3BNC9 293 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 ALAS1P13196 640 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 CPT1AP50416 773 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 HTRA4P83105 476 aaPredicted RBP18.24■□□□□ 0.51
U2AF1-211ENST00000486519 HYAL1Q12794 435 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 PTPROQ16827 1216 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 TMED8Q6PL24 325 aaPredicted RBP18.24■□□□□ 0.51
U2AF1-211ENST00000486519 GPHNQ9NQX3 736 aaPredicted RBP18.24■□□□□ 0.51
U2AF1-211ENST00000486519 ATP8A2Q9NTI2 1148 aa18.24■□□□□ 0.51
U2AF1-211ENST00000486519 GOLIM4O00461 696 aa18.23■□□□□ 0.51
U2AF1-211ENST00000486519 LGR5O75473 907 aa18.23■□□□□ 0.51
U2AF1-211ENST00000486519 PDGFBP01127 241 aaPredicted RBP18.23■□□□□ 0.51
U2AF1-211ENST00000486519 CKBP12277 381 aa18.23■□□□□ 0.51
U2AF1-211ENST00000486519 AVPR2P30518 371 aa18.23■□□□□ 0.51
U2AF1-211ENST00000486519 RASGRP2Q7LDG7 609 aa18.23■□□□□ 0.51
U2AF1-211ENST00000486519 ASIC4Q96FT7 647 aa18.23■□□□□ 0.51
U2AF1-211ENST00000486519 FSD1Q9BTV5 496 aa18.23■□□□□ 0.51
U2AF1-211ENST00000486519 NOP58Q9Y2X3 529 aaKnown RBP18.23■□□□□ 0.51
U2AF1-211ENST00000486519 INSL6Q9Y581 213 aa18.23■□□□□ 0.51
U2AF1-211ENST00000486519 DNAH14Q0VDD8 3507 aa18.23■□□□□ 0.51
U2AF1-211ENST00000486519 RBM47A0AV96 593 aaKnown RBP18.22■□□□□ 0.51
U2AF1-211ENST00000486519 PROB1E7EW31 1015 aa18.22■□□□□ 0.51
U2AF1-211ENST00000486519 CSPG5O95196 566 aa18.22■□□□□ 0.51
U2AF1-211ENST00000486519 ID4P47928 161 aa18.22■□□□□ 0.51
U2AF1-211ENST00000486519 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
U2AF1-211ENST00000486519 AACSQ86V21 672 aa18.22■□□□□ 0.51
U2AF1-211ENST00000486519 MYOCDQ8IZQ8 938 aa18.22■□□□□ 0.51
U2AF1-211ENST00000486519 CAGE1Q8TC20 777 aa18.22■□□□□ 0.51
U2AF1-211ENST00000486519 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
U2AF1-211ENST00000486519 POP1Q99575 1024 aaKnown RBP18.22■□□□□ 0.51
U2AF1-211ENST00000486519 CTNNA3Q9UI47 895 aa18.22■□□□□ 0.51
U2AF1-211ENST00000486519 TRPC6Q9Y210 931 aa18.22■□□□□ 0.51
U2AF1-211ENST00000486519 TRIM27P14373 513 aa18.21■□□□□ 0.51
U2AF1-211ENST00000486519 RARSP54136 660 aaKnown RBP18.21■□□□□ 0.51
U2AF1-211ENST00000486519 PTPN11Q06124 597 aaPredicted RBP18.21■□□□□ 0.51
U2AF1-211ENST00000486519 SMAD4Q13485 552 aaKnown RBP18.21■□□□□ 0.51
U2AF1-211ENST00000486519 NSMFQ6X4W1 530 aa18.21■□□□□ 0.51
U2AF1-211ENST00000486519 TRMT2AQ8IZ69 625 aaKnown RBP18.21■□□□□ 0.51
U2AF1-211ENST00000486519 OSBPL7Q9BZF2 842 aa18.21■□□□□ 0.51
U2AF1-211ENST00000486519 ZFHX4Q86UP3 3567 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 A6NJR5 290 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 TMEM232C9JQI7 657 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 ADD2P35612 726 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 ALDH5A1P51649 535 aaPredicted RBP18.2■□□□□ 0.5
U2AF1-211ENST00000486519 RBL2Q08999 1139 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 IKBKEQ14164 716 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 TRIM71Q2Q1W2 868 aaKnown RBP18.2■□□□□ 0.5
U2AF1-211ENST00000486519 TMEM192Q8IY95 271 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 KAT2BQ92831 832 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 CLUAP1Q96AJ1 413 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 CEP95Q96GE4 821 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 KMT2BQ9UMN6 2715 aaPredicted RBP18.2■□□□□ 0.5
U2AF1-211ENST00000486519 DMXL1Q9Y485 3027 aa18.2■□□□□ 0.5
U2AF1-211ENST00000486519 LOC730098B7Z3J9 87 aa18.19■□□□□ 0.5
U2AF1-211ENST00000486519 GRM6O15303 877 aa18.19■□□□□ 0.5
U2AF1-211ENST00000486519 ARIH2O95376 493 aa18.19■□□□□ 0.5
U2AF1-211ENST00000486519 TTF1Q15361 905 aaPredicted RBP18.19■□□□□ 0.5
U2AF1-211ENST00000486519 PKN1Q16512 942 aa18.19■□□□□ 0.5
U2AF1-211ENST00000486519 ZNF618Q5T7W0 954 aa18.19■□□□□ 0.5
U2AF1-211ENST00000486519 FBXO11Q86XK2 927 aa18.19■□□□□ 0.5
U2AF1-211ENST00000486519 BMP3P12645 472 aa18.18■□□□□ 0.5
U2AF1-211ENST00000486519 ZNF200P98182 395 aaPredicted RBP18.18■□□□□ 0.5
U2AF1-211ENST00000486519 HIC1Q14526 733 aa18.18■□□□□ 0.5
U2AF1-211ENST00000486519 SLFN13Q68D06 897 aa18.18■□□□□ 0.5
U2AF1-211ENST00000486519 CCDC155Q8N6L0 562 aa18.18■□□□□ 0.5
U2AF1-211ENST00000486519 ARHGAP45Q92619 1136 aa18.18■□□□□ 0.5
U2AF1-211ENST00000486519 IGFLR1Q9H665 355 aa18.18■□□□□ 0.5
U2AF1-211ENST00000486519 IL1RAPL2Q9NP60 686 aa18.18■□□□□ 0.5
U2AF1-211ENST00000486519 CD207Q9UJ71 328 aa18.18■□□□□ 0.5
U2AF1-211ENST00000486519 SLC4A4Q9Y6R1 1079 aa18.18■□□□□ 0.5
U2AF1-211ENST00000486519 PRDM1O75626 825 aa18.17■□□□□ 0.5
U2AF1-211ENST00000486519 LINC00271P0C7V0 271 aa18.17■□□□□ 0.5
U2AF1-211ENST00000486519 SIGLEC14Q08ET2 396 aa18.17■□□□□ 0.5
U2AF1-211ENST00000486519 BAATQ14032 418 aaPredicted RBP18.17■□□□□ 0.5
U2AF1-211ENST00000486519 SLC30A10Q6XR72 485 aa18.17■□□□□ 0.5
U2AF1-211ENST00000486519 GMCL1P1Q8NEA9 526 aa18.17■□□□□ 0.5
U2AF1-211ENST00000486519 DBF4BQ8NFT6 615 aa18.17■□□□□ 0.5
U2AF1-211ENST00000486519 MKL1Q969V6 931 aa18.17■□□□□ 0.5
U2AF1-211ENST00000486519 MSLNLQ96KJ4 702 aa18.17■□□□□ 0.5
U2AF1-211ENST00000486519 ISY1Q9ULR0 285 aaKnown RBP18.17■□□□□ 0.5
U2AF1-211ENST00000486519 KIAA1671Q9BY89 1806 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 GVINP1Q7Z2Y8 2422 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 NFIBO00712 420 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 UPP2O95045 317 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 PPP2R5BQ15173 497 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 TKFCQ3LXA3 575 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 SESTD1Q86VW0 696 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms