RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 NONOQ15233 471 aaKnown RBP eCLIP7.94□□□□□ -1.14
UBR4-214ENST00000486515 PKN1Q16512 942 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 FOXD4L5Q5VV16 416 aaPredicted RBP7.94□□□□□ -1.14
UBR4-214ENST00000486515 RNF207Q6ZRF8 634 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 RIOX2Q8IUF8 465 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 TDHQ8IZJ6 230 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 SHCBP1Q8NEM2 672 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 CD99L2Q8TCZ2 262 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 FOXD4L4Q8WXT5 416 aaPredicted RBP7.94□□□□□ -1.14
UBR4-214ENST00000486515 SHISA4Q96DD7 197 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 GBP4Q96PP9 640 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 PHF20Q9BVI0 1012 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 ZMYND12Q9H0C1 365 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 RIC8AQ9NPQ8 531 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 ADD3Q9UEY8 706 aaKnown RBP7.94□□□□□ -1.14
UBR4-214ENST00000486515 CFAP45Q9UL16 551 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 KCNJ14Q9UNX9 436 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 MYH4Q9Y623 1939 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 POTEB2H3BUK9 544 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 ERCC3P19447 782 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 HOXD10P28358 340 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 MOGSQ13724 837 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 SF3A1Q15459 793 aaKnown RBP7.93□□□□□ -1.14
UBR4-214ENST00000486515 RILPL1Q5EBL4 403 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 ARHGEF16Q5VV41 709 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 UBE2Q1Q7Z7E8 422 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 DPP9Q86TI2 863 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 FERMT3Q86UX7 667 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 FCHSD1Q86WN1 690 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 NOSTRINQ8IVI9 506 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 AIFM3Q96NN9 605 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 MMP19Q99542 508 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 PTPN18Q99952 460 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 BIN2Q9UBW5 565 aaPredicted RBP7.93□□□□□ -1.14
UBR4-214ENST00000486515 TCEAL9Q9UHQ7 104 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 CPA4Q9UI42 421 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 ZNF214Q9UL59 606 aaPredicted RBP7.93□□□□□ -1.14
UBR4-214ENST00000486515 ADAMTS5Q9UNA0 930 aa7.93□□□□□ -1.14
UBR4-214ENST00000486515 GOLGA6L4A6NEF3 574 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 BTBD18B2RXH4 712 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 IGF2BP3O00425 579 aaKnown RBP eCLIP7.92□□□□□ -1.14
UBR4-214ENST00000486515 DTNBO60941 627 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 BMP15O95972 392 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 F13A1P00488 732 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 TRAPPC10P48553 1259 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 FCGRTP55899 365 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 KRT85P78386 507 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 CRHR2Q13324 411 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 FOXD4L6Q3SYB3 417 aaPredicted RBP7.92□□□□□ -1.14
UBR4-214ENST00000486515 JAKMIP3Q5VZ66 844 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 ATL3Q6DD88 541 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 FOXD4L3Q6VB84 417 aaPredicted RBP7.92□□□□□ -1.14
UBR4-214ENST00000486515 PIK3AP1Q6ZUJ8 805 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 PLEKHH3Q7Z736 793 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 DAGLBQ8NCG7 672 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 NSUN6Q8TEA1 469 aaKnown RBP7.92□□□□□ -1.14
UBR4-214ENST00000486515 CDX2Q99626 313 aaPredicted RBP7.92□□□□□ -1.14
UBR4-214ENST00000486515 LRFN3Q9BTN0 628 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 MOV10L1Q9BXT6 1211 aaKnown RBP7.92□□□□□ -1.14
UBR4-214ENST00000486515 BTBD7Q9P203 1132 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 RBPJLQ9UBG7 517 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 MORF4L1Q9UBU8 362 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 PTCH2Q9Y6C5 1203 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 BDP1A6H8Y1 2624 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 PHIPQ8WWQ0 1821 aa7.92□□□□□ -1.14
UBR4-214ENST00000486515 PIK3CDO00329 1044 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 TNPO2O14787 897 aaKnown RBP7.91□□□□□ -1.14
UBR4-214ENST00000486515 PPP1R11O60927 126 aaPredicted RBP7.91□□□□□ -1.14
UBR4-214ENST00000486515 BAG4O95429 457 aaKnown RBP7.91□□□□□ -1.14
UBR4-214ENST00000486515 BRD1O95696 1058 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 GCFC2P16383 781 aaKnown RBP7.91□□□□□ -1.14
UBR4-214ENST00000486515 HOXA13P31271 388 aaPredicted RBP7.91□□□□□ -1.14
UBR4-214ENST00000486515 RPS6P62753 249 aaKnown RBP7.91□□□□□ -1.14
UBR4-214ENST00000486515 SP3Q02447 781 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 BAATQ14032 418 aaPredicted RBP7.91□□□□□ -1.14
UBR4-214ENST00000486515 UBE2SQ16763 222 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 USP17L6PQ6QN14 398 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 NEK8Q86SG6 692 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 ABRAQ8N0Z2 381 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 DNERQ8NFT8 737 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 SOCS4Q8WXH5 440 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 RMDN3Q96TC7 470 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 NUDT12Q9BQG2 462 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 ANO3Q9BYT9 981 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 SCAND2PQ9GZW5 306 aaPredicted RBP7.91□□□□□ -1.14
UBR4-214ENST00000486515 GJB4Q9NTQ9 266 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 PCDHA6Q9UN73 950 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 MTMR6Q9Y217 621 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 PCDHA8Q9Y5H6 950 aa7.91□□□□□ -1.14
UBR4-214ENST00000486515 ZNF536O15090 1300 aa7.9□□□□□ -1.14
UBR4-214ENST00000486515 ASB14A6NK59 587 aa7.9□□□□□ -1.14
UBR4-214ENST00000486515 NFIBO00712 420 aa7.9□□□□□ -1.14
UBR4-214ENST00000486515 CCNT1O60563 726 aaKnown RBP7.9□□□□□ -1.14
UBR4-214ENST00000486515 ATXN8OSP0DMR3 200 aa7.9□□□□□ -1.14
UBR4-214ENST00000486515 PTMSP20962 102 aa7.9□□□□□ -1.14
UBR4-214ENST00000486515 U2AF2P26368 475 aaKnown RBP eCLIP7.9□□□□□ -1.14
UBR4-214ENST00000486515 CCND2P30279 289 aa7.9□□□□□ -1.14
UBR4-214ENST00000486515 HSD17B4P51659 736 aa7.9□□□□□ -1.14
UBR4-214ENST00000486515 PDE4DQ08499 809 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms