RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PDE4AP27815 886 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 GRIN2CQ14957 1233 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 SEC23AQ15436 765 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 RAB30Q15771 203 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 QRICH1Q2TAL8 776 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 TTC22Q5TAA0 569 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 NFRKBQ6P4R8 1299 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 CCDC62Q6P9F0 684 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 FBXO11Q86XK2 927 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 SAMD3Q8N6K7 520 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 NSUN6Q8TEA1 469 aaKnown RBP13.38□□□□□ -0.27
SCFD1-206ENST00000484733 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 PBX4Q9BYU1 374 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 WNT8AQ9H1J5 351 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 JMJD4Q9H9V9 463 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 TBC1D5Q92609 795 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 MTMR8Q96EF0 704 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 TAAR1Q96RJ0 339 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 MAP3K20Q9NYL2 800 aaKnown RBP13.38□□□□□ -0.27
SCFD1-206ENST00000484733 COL6A3P12111 3177 aa13.37□□□□□ -0.27
SCFD1-206ENST00000484733 NBPF20Q3BBV1 942 aa13.37□□□□□ -0.27
SCFD1-206ENST00000484733 IFIT1BQ5T764 474 aaKnown RBP13.37□□□□□ -0.27
SCFD1-206ENST00000484733 VWCEQ96DN2 955 aa13.37□□□□□ -0.27
SCFD1-206ENST00000484733 IL25Q9H293 177 aa13.37□□□□□ -0.27
SCFD1-206ENST00000484733 MSRAQ9UJ68 235 aa13.37□□□□□ -0.27
SCFD1-206ENST00000484733 GSPT1P15170 499 aaKnown RBP13.36□□□□□ -0.27
SCFD1-206ENST00000484733 RFC2P35250 354 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 CCL23P55773 120 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 STXBP2Q15833 593 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 COPS5Q92905 334 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-206ENST00000484733 COL20A1Q9P218 1284 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 MYH6P13533 1939 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 KIAA1217Q5T5P2 1943 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 GRXCR1A8MXD5 290 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 ARIH2O95376 493 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 GH1P01241 217 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 PBX2P40425 430 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 HSD17B4P51659 736 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
SCFD1-206ENST00000484733 TRMT13Q9NUP7 481 aaKnown RBP13.36□□□□□ -0.27
SCFD1-206ENST00000484733 CXXC1Q9P0U4 656 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-206ENST00000484733 PALM3A6NDB9 673 aaPredicted RBP13.35□□□□□ -0.27
SCFD1-206ENST00000484733 CYB5R4Q7L1T6 521 aa13.35□□□□□ -0.27
SCFD1-206ENST00000484733 SESTD1Q86VW0 696 aa13.35□□□□□ -0.27
SCFD1-206ENST00000484733 RMDN3Q96TC7 470 aa13.35□□□□□ -0.27
SCFD1-206ENST00000484733 MAD2L2Q9UI95 211 aa13.35□□□□□ -0.27
SCFD1-206ENST00000484733 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
SCFD1-206ENST00000484733 TRDNQ13061 729 aa13.35□□□□□ -0.27
SCFD1-206ENST00000484733 TRAF1Q13077 416 aa13.35□□□□□ -0.27
SCFD1-206ENST00000484733 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
SCFD1-206ENST00000484733 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
SCFD1-206ENST00000484733 VAT1LQ9HCJ6 419 aa13.35□□□□□ -0.27
SCFD1-206ENST00000484733 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
SCFD1-206ENST00000484733 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
SCFD1-206ENST00000484733 KLRF2D3W0D1 207 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
SCFD1-206ENST00000484733 CYP2C9P11712 490 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 CHMLP26374 656 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 ARHGAP1Q07960 439 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 SCLYQ96I15 445 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 PXMP2Q9NR77 195 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 SLC4A7Q9Y6M7 1214 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 OPLAHO14841 1288 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 ZBTB5O15062 677 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
SCFD1-206ENST00000484733 MMP3P08254 477 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 GRM4Q14833 912 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 ARHGEF16Q5VV41 709 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 OTOP2Q7RTS6 562 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 GAS2L1Q99501 681 aaPredicted RBP13.34□□□□□ -0.27
SCFD1-206ENST00000484733 RIOX1Q9H6W3 641 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 DDX41Q9UJV9 622 aaKnown RBP13.34□□□□□ -0.27
SCFD1-206ENST00000484733 PCDHA11Q9Y5I1 949 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 GBF1Q92538 1859 aa13.34□□□□□ -0.27
SCFD1-206ENST00000484733 NR3C2P08235 984 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 CYP21A2P08686 494 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 BFSP2Q13515 415 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 LY6KQ17RY6 165 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 FAM47CQ5HY64 1035 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 SEPT14Q6ZU15 432 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 STOX1Q6ZVD7 989 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 RETREG2Q8NC44 543 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 AFG1LQ8WV93 481 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 TANC1Q9C0D5 1861 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 IQCF3P0C7M6 154 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 CASTP20810 708 aaKnown RBP13.33□□□□□ -0.28
SCFD1-206ENST00000484733 PTH1RQ03431 593 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 KCNV1Q6PIU1 500 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 CCDC155Q8N6L0 562 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 KAT2BQ92831 832 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 NKX2-4Q9H2Z4 354 aa13.33□□□□□ -0.28
SCFD1-206ENST00000484733 YBX2Q9Y2T7 364 aaKnown RBP13.33□□□□□ -0.28
SCFD1-206ENST00000484733 PPP1R11O60927 126 aaPredicted RBP13.32□□□□□ -0.28
SCFD1-206ENST00000484733 CFBP00751 764 aa13.32□□□□□ -0.28
SCFD1-206ENST00000484733 ACTN1P12814 892 aa13.32□□□□□ -0.28
SCFD1-206ENST00000484733 RBL2Q08999 1139 aa13.32□□□□□ -0.28
SCFD1-206ENST00000484733 LAMC2Q13753 1193 aa13.32□□□□□ -0.28
SCFD1-206ENST00000484733 PDCD2LQ9BRP1 358 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms