RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 CUL4BQ13620 913 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 NLRX1Q86UT6 975 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 FOXP4Q8IVH2 680 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-218ENST00000482171 GOLGA6L10A0A0M3HER8 536 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 CCDC172P0C7W6 258 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 STAT2P52630 851 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 PTPROQ16827 1216 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 DALRD3Q5D0E6 543 aaKnown RBP12.48□□□□□ -0.41
SMPD4-218ENST00000482171 SYDE2Q5VT97 1194 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 ATP6V0A2Q9Y487 856 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 FLT1P17948 1338 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 B4DLN1 442 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 IKBKBO14920 756 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 CETN2P41208 172 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 MAGEA1P43355 309 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 COPB1P53618 953 aaKnown RBP12.48□□□□□ -0.41
SMPD4-218ENST00000482171 LRCH2Q5VUJ6 765 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 ARHGEF16Q5VV41 709 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 USP37Q86T82 979 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 PNMA6FA0A0J9YX94 578 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 ST3GAL1Q11201 340 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 TRIM14Q14142 442 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 CPLX4Q7Z7G2 160 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 OR8K1Q8NGG5 319 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 JAKMIP2Q96AA8 810 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 FAM204AQ9H8W3 233 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 ADAM21Q9UKJ8 722 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 KDM3AQ9Y4C1 1321 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 NWD1Q149M9 1564 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 NRXN3Q9Y4C0 1643 aa12.48□□□□□ -0.41
SMPD4-218ENST00000482171 MON2Q7Z3U7 1717 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 KIF13AQ9H1H9 1805 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 GSTTP1A0A1W2PQM5 241 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 SMIM22K7EJ46 135 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 MAP2K2P36507 400 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 SEPT7Q16181 437 aaKnown RBP12.47□□□□□ -0.41
SMPD4-218ENST00000482171 ARHGAP44Q17R89 818 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 ANKRD13CQ8N6S4 541 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 BCAS4Q8TDM0 211 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 CRAMP1Q96RY5 1269 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 PLEKHG2Q9H7P9 1386 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 CSADQ9Y600 493 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 SMTNP53814 917 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 SF3A3Q12874 501 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■■■■□ 20.7
SMPD4-218ENST00000482171 TUBB2AQ13885 445 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 GRM4Q14833 912 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 TUBB2BQ9BVA1 445 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 F5H6K3 240 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
SMPD4-218ENST00000482171 CALUO43852 315 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-218ENST00000482171 KLRC3Q07444 240 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 TMEM179Q6ZVK1 233 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 PAF1Q8N7H5 531 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 CNOT6LQ96LI5 555 aaKnown RBP12.47□□□□□ -0.41
SMPD4-218ENST00000482171 TUBGCP2Q9BSJ2 902 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
SMPD4-218ENST00000482171 PHLPP2Q6ZVD8 1323 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 PEAK1Q9H792 1746 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 ATP8B1O43520 1251 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 STX10O60499 249 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 ERCC5P28715 1186 aaPredicted RBP12.46□□□□□ -0.41
SMPD4-218ENST00000482171 CCT5P48643 541 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 NAA25Q14CX7 972 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 FAM83BQ5T0W9 1011 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 B4GALNT4Q76KP1 1039 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 DEFB132Q7Z7B7 95 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 FAM178BQ8IXR5 827 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 SLFN12Q8IYM2 578 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 RTKN2Q8IZC4 609 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 ANO3Q9BYT9 981 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 IMPG2Q9BZV3 1241 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 DISC1Q9NRI5 854 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 PIM2Q9P1W9 311 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 POLLQ9UGP5 575 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 FOSP01100 380 aaPredicted RBP12.46□□□□□ -0.41
SMPD4-218ENST00000482171 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 GADL1Q6ZQY3 521 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 FNBP1Q96RU3 617 aa12.46□□□□□ -0.41
SMPD4-218ENST00000482171 TLDC2A0PJX2 215 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 CCDC151A5D8V7 595 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.42
SMPD4-218ENST00000482171 KRT5P13647 590 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 GRIN1Q05586 938 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 ADAM9Q13443 819 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 GPR162Q16538 588 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 IFI16Q16666 785 aaKnown RBP12.46□□□□□ -0.42
SMPD4-218ENST00000482171 XKR9Q5GH70 373 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 TTC19Q6DKK2 380 aaPredicted RBP12.46□□□□□ -0.42
SMPD4-218ENST00000482171 CCDC84Q86UT8 332 aaPredicted RBP12.46□□□□□ -0.42
SMPD4-218ENST00000482171 SULF1Q8IWU6 871 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 EXOC4Q96A65 974 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 CDC23Q9UJX2 597 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 JRKLQ9Y4A0 524 aa12.46□□□□□ -0.42
SMPD4-218ENST00000482171 TRIM49BA6NDI0 452 aa12.45□□□□□ -0.42
SMPD4-218ENST00000482171 ZMYND10O75800 440 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms