RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 RMDN3Q96TC7 470 aa25.84■■□□□ 1.73
GPCPD1-206ENST00000481690 SEZ6LQ9BYH1 1024 aa25.84■■□□□ 1.73
GPCPD1-206ENST00000481690 MAF1Q9H063 256 aa25.84■■□□□ 1.73
GPCPD1-206ENST00000481690 SENP2Q9HC62 589 aa25.84■■□□□ 1.73
GPCPD1-206ENST00000481690 PALM3A6NDB9 673 aaPredicted RBP25.83■■□□□ 1.73
GPCPD1-206ENST00000481690 CYP2C18P33260 490 aa25.83■■□□□ 1.73
GPCPD1-206ENST00000481690 PURAQ00577 322 aaKnown RBP25.83■■□□□ 1.73
GPCPD1-206ENST00000481690 TTLL4Q14679 1199 aa25.83■■□□□ 1.73
GPCPD1-206ENST00000481690 GRM4Q14833 912 aa25.83■■□□□ 1.73
GPCPD1-206ENST00000481690 ARHGEF16Q5VV41 709 aa25.83■■□□□ 1.73
GPCPD1-206ENST00000481690 MAP4K1Q92918 833 aa25.83■■□□□ 1.73
GPCPD1-206ENST00000481690 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.83■■□□□ 1.731e-11■■■□□ 16.3
GPCPD1-206ENST00000481690 TRPV6Q9H1D0 765 aa25.83■■□□□ 1.73
GPCPD1-206ENST00000481690 HIPK3Q9H422 1215 aa25.83■■□□□ 1.73
GPCPD1-206ENST00000481690 ZBTB5O15062 677 aa25.82■■□□□ 1.72
GPCPD1-206ENST00000481690 B4GALT4O60513 344 aa25.82■■□□□ 1.72
GPCPD1-206ENST00000481690 ARIH2O95376 493 aa25.82■■□□□ 1.72
GPCPD1-206ENST00000481690 EIF2AK2P19525 551 aaKnown RBP25.82■■□□□ 1.72
GPCPD1-206ENST00000481690 TMEM67Q5HYA8 995 aa25.82■■□□□ 1.72
GPCPD1-206ENST00000481690 SEPT14Q6ZU15 432 aa25.82■■□□□ 1.72
GPCPD1-206ENST00000481690 SLC17A8Q8NDX2 589 aa25.82■■□□□ 1.72
GPCPD1-206ENST00000481690 GUCD1Q96NT3 240 aa25.82■■□□□ 1.72
GPCPD1-206ENST00000481690 SCN10AQ9Y5Y9 1956 aa25.82■■□□□ 1.72
GPCPD1-206ENST00000481690 PPP1R11O60927 126 aaPredicted RBP25.81■■□□□ 1.72
GPCPD1-206ENST00000481690 ACRP10323 421 aa25.81■■□□□ 1.72
GPCPD1-206ENST00000481690 MTMR8Q96EF0 704 aa25.81■■□□□ 1.72
GPCPD1-206ENST00000481690 MTG1Q9BT17 334 aaPredicted RBP25.81■■□□□ 1.72
GPCPD1-206ENST00000481690 PCDHA1Q9Y5I3 950 aa25.81■■□□□ 1.72
GPCPD1-206ENST00000481690 UMODL1Q5DID0 1318 aa25.81■■□□□ 1.72
GPCPD1-206ENST00000481690 MYH7BA7E2Y1 1941 aa25.8■■□□□ 1.72
GPCPD1-206ENST00000481690 ANTXR2P58335 489 aa25.8■■□□□ 1.72
GPCPD1-206ENST00000481690 STXBP2Q15833 593 aa25.8■■□□□ 1.72
GPCPD1-206ENST00000481690 CATIPQ7Z7H3 387 aa25.8■■□□□ 1.72
GPCPD1-206ENST00000481690 IWS1Q96ST2 819 aa25.8■■□□□ 1.72
GPCPD1-206ENST00000481690 ALDH8A1Q9H2A2 487 aaPredicted RBP25.8■■□□□ 1.72
GPCPD1-206ENST00000481690 OPLAHO14841 1288 aa25.79■■□□□ 1.72
GPCPD1-206ENST00000481690 FAM47CQ5HY64 1035 aa25.79■■□□□ 1.72
GPCPD1-206ENST00000481690 TMEM240Q5SV17 173 aa25.79■■□□□ 1.72
GPCPD1-206ENST00000481690 MB21D2Q8IYB1 491 aaPredicted RBP25.79■■□□□ 1.72
GPCPD1-206ENST00000481690 PIGSQ96S52 555 aa25.79■■□□□ 1.72
GPCPD1-206ENST00000481690 PXMP2Q9NR77 195 aa25.79■■□□□ 1.72
GPCPD1-206ENST00000481690 HSD17B4P51659 736 aa25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 CCL23P55773 120 aa25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 CHMP4BP1P59074 171 aa25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 LY6KQ17RY6 165 aa25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 SLC35G1Q2M3R5 365 aa25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 PSRC1Q6PGN9 363 aaPredicted RBP25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 C16orf59Q7L2K0 433 aa25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 PPP1R13LQ8WUF5 828 aa25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 NOC4LQ9BVI4 516 aaKnown RBP25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 TRMT13Q9NUP7 481 aaKnown RBP25.78■■□□□ 1.72
GPCPD1-206ENST00000481690 LAMA2P24043 3122 aaKnown RBP25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 A6NJR5 290 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 HOXA13P31271 388 aaPredicted RBP25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 TROAPQ12815 778 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 CASC1Q6TDU7 716 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 ZNF365Q70YC5 407 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 SKAP1Q86WV1 359 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 PIBF1Q8WXW3 757 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 ESYT1Q9BSJ8 1104 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 LSG1Q9H089 658 aaKnown RBP25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 SEMA6BQ9H3T3 888 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 RIOX1Q9H6W3 641 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 IL23AQ9NPF7 189 aa25.77■■□□□ 1.72
GPCPD1-206ENST00000481690 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 KPNA6O60684 536 aa25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 GH1P01241 217 aa25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 NR3C2P08235 984 aa25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 TRAF1Q13077 416 aa25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 NBPF20Q3BBV1 942 aa25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 CCDC62Q6P9F0 684 aa25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 IGDCC4Q8TDY8 1250 aa25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 AFG1LQ8WV93 481 aa25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 TTYH1Q9H313 450 aaPredicted RBP25.76■■□□□ 1.71
GPCPD1-206ENST00000481690 PRC1O43663 620 aa25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 CYTH3O43739 400 aa25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 SUPT20HL2P0C7V6 817 aa25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 CYP2C9P11712 490 aa25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 MYCLP12524 364 aaPredicted RBP25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 CENPQQ7L2Z9 268 aaPredicted RBP25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 CDX2Q99626 313 aaPredicted RBP25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 MYL10Q9BUA6 226 aa25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 WNT8AQ9H1J5 351 aa25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 ANO2Q9NQ90 1003 aa25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 MRVI1Q9Y6F6 885 aa25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 SCN5AQ14524 2016 aa25.75■■□□□ 1.71
GPCPD1-206ENST00000481690 GBF1Q92538 1859 aa25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 EIF3JO75822 258 aaKnown RBP25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 MMP3P08254 477 aa25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 GHRHRQ02643 423 aa25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 NFXL1Q6ZNB6 911 aa25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 ZNF654Q8IZM8 581 aa25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 CTCFLQ8NI51 663 aaPredicted RBP25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 PDCD2LQ9BRP1 358 aa25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 LY9Q9HBG7 655 aa25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 MAP3K20Q9NYL2 800 aaKnown RBP25.74■■□□□ 1.71
GPCPD1-206ENST00000481690 COL6A3P12111 3177 aa25.73■■□□□ 1.71
GPCPD1-206ENST00000481690 TANC1Q9C0D5 1861 aa25.73■■□□□ 1.71
GPCPD1-206ENST00000481690 PNMA6FA0A0J9YX94 578 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms