RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 PXMP2Q9NR77 195 aa14.13□□□□□ -0.15
PTPRF-213ENST00000481019 RBM28Q9NW13 759 aaKnown RBP14.13□□□□□ -0.15
PTPRF-213ENST00000481019 ADD3Q9UEY8 706 aaKnown RBP14.13□□□□□ -0.15
PTPRF-213ENST00000481019 V9GY48 417 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-213ENST00000481019 RBM47A0AV96 593 aaKnown RBP14.12□□□□□ -0.15
PTPRF-213ENST00000481019 MEIS2O14770 477 aa14.12□□□□□ -0.15
PTPRF-213ENST00000481019 RARBP10826 455 aa14.12□□□□□ -0.15
PTPRF-213ENST00000481019 RCAN1P53805 252 aa14.12□□□□□ -0.15
PTPRF-213ENST00000481019 ANAPC15P60006 121 aa14.12□□□□□ -0.15
PTPRF-213ENST00000481019 UBE2SQ16763 222 aa14.12□□□□□ -0.15
PTPRF-213ENST00000481019 CCSAPQ6IQ19 270 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-213ENST00000481019 USP17L6PQ6QN14 398 aa14.12□□□□□ -0.15
PTPRF-213ENST00000481019 NECAB2Q7Z6G3 386 aa14.12□□□□□ -0.15
PTPRF-213ENST00000481019 PHKBQ93100 1093 aa14.12□□□□□ -0.15
PTPRF-213ENST00000481019 KIF2CQ99661 725 aa14.12□□□□□ -0.15
PTPRF-213ENST00000481019 SEC63Q9UGP8 760 aaKnown RBP14.12□□□□□ -0.15
PTPRF-213ENST00000481019 GNEQ9Y223 722 aaKnown RBP14.12□□□□□ -0.15
PTPRF-213ENST00000481019 GCOM1H8Y6P7 765 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-213ENST00000481019 DNM1LO00429 736 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 DUSP11O75319 330 aaKnown RBP14.11□□□□□ -0.15
PTPRF-213ENST00000481019 ARIH2O95376 493 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 POLR2MP0CAP2 368 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 BEX3Q00994 111 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 TNFAIP2Q03169 654 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 PDE4DQ08499 809 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 STK3Q13188 491 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 PKN1Q16512 942 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 LRRC26Q2I0M4 334 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 HEATR3Q7Z4Q2 680 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 FCHSD1Q86WN1 690 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 KLHDC9Q8NEP7 349 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 NSUN6Q8TEA1 469 aaKnown RBP14.11□□□□□ -0.15
PTPRF-213ENST00000481019 COPS5Q92905 334 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 FERMT2Q96AC1 680 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 SENP6Q9GZR1 1112 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-213ENST00000481019 UPF3AQ9H1J1 476 aaKnown RBP14.11□□□□□ -0.15
PTPRF-213ENST00000481019 VTA1Q9NP79 307 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 TPCN1Q9ULQ1 816 aa14.11□□□□□ -0.15
PTPRF-213ENST00000481019 STXBP3O00186 592 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 RGS20O76081 388 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 LARGE1O95461 756 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 NR3C2P08235 984 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 CAPN2P17655 700 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 ATN1P54259 1190 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-213ENST00000481019 AK2P54819 239 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 GJA9P57773 515 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 BECN1Q14457 450 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 ARHGEF16Q5VV41 709 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 PDCD2LQ9BRP1 358 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 MAF1Q9H063 256 aa14.1□□□□□ -0.15
PTPRF-213ENST00000481019 DAXXQ9UER7 740 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-213ENST00000481019 RANBP2P49792 3224 aaKnown RBP14.09□□□□□ -0.15
PTPRF-213ENST00000481019 LOC102724159A0A0B4J2E5 919 aa14.09□□□□□ -0.15
PTPRF-213ENST00000481019 DYNC1LI2O43237 492 aaPredicted RBP14.09□□□□□ -0.15
PTPRF-213ENST00000481019 PGM5Q15124 567 aa14.09□□□□□ -0.15
PTPRF-213ENST00000481019 PWP2Q15269 919 aaKnown RBP14.09□□□□□ -0.15
PTPRF-213ENST00000481019 IQSEC1Q6DN90 963 aa14.09□□□□□ -0.15
PTPRF-213ENST00000481019 NOL8Q76FK4 1167 aaKnown RBP14.09□□□□□ -0.15
PTPRF-213ENST00000481019 ARRDC4Q8NCT1 418 aa14.09□□□□□ -0.15
PTPRF-213ENST00000481019 DPF3Q92784 378 aa14.09□□□□□ -0.15
PTPRF-213ENST00000481019 WDR11Q9BZH6 1224 aa14.09□□□□□ -0.15
PTPRF-213ENST00000481019 ALDH8A1Q9H2A2 487 aaPredicted RBP14.09□□□□□ -0.15
PTPRF-213ENST00000481019 PHF24Q9UPV7 400 aa14.09□□□□□ -0.15
PTPRF-213ENST00000481019 KIAA1217Q5T5P2 1943 aa14.09□□□□□ -0.15
PTPRF-213ENST00000481019 FRMPD4Q14CM0 1322 aa14.09□□□□□ -0.15
PTPRF-213ENST00000481019 H0YGN5 161 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 PIK3CDO00329 1044 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 C6orf222P0C671 652 aaPredicted RBP14.08□□□□□ -0.16
PTPRF-213ENST00000481019 MYCLP12524 364 aaPredicted RBP14.08□□□□□ -0.16
PTPRF-213ENST00000481019 MRPS9P82933 396 aaKnown RBP14.08□□□□□ -0.16
PTPRF-213ENST00000481019 KCNA10Q16322 511 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 PFKFB3Q16875 520 aaPredicted RBP14.08□□□□□ -0.16
PTPRF-213ENST00000481019 DUSP28Q4G0W2 176 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 CCDC62Q6P9F0 684 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 SEPT14Q6ZU15 432 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 TLK2Q86UE8 772 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 ZNF274Q96GC6 653 aaPredicted RBP14.08□□□□□ -0.16
PTPRF-213ENST00000481019 IWS1Q96ST2 819 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 PSTPIP2Q9H939 334 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 BARHL2Q9NY43 387 aa14.08□□□□□ -0.16
PTPRF-213ENST00000481019 MAP3K20Q9NYL2 800 aaKnown RBP14.08□□□□□ -0.16
PTPRF-213ENST00000481019 A0A1W2PQ45 241 aaPredicted RBP14.07□□□□□ -0.16
PTPRF-213ENST00000481019 A0A1W2PQY0 241 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 KBTBD13C9JR72 458 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 PRPF3O43395 683 aaKnown RBP14.07□□□□□ -0.16
PTPRF-213ENST00000481019 IFNAR1P17181 557 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 CST5P28325 142 aaPredicted RBP14.07□□□□□ -0.16
PTPRF-213ENST00000481019 ACLYP53396 1101 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 NAPAP54920 295 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 NKX3-2P78367 333 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 ST3GAL1Q11201 340 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 SCRN1Q12765 414 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 TRAF1Q13077 416 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 PPP2R5BQ15173 497 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 RABEP1Q15276 862 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 STXBP2Q15833 593 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 LY6KQ17RY6 165 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 RNF180Q86T96 592 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 VSIG10LQ86VR7 867 aa14.07□□□□□ -0.16
PTPRF-213ENST00000481019 C7orf61Q8IZ16 206 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms