RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	TEX33	O43247	280 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	BAG3	O95817	575 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ZBTB48	P10074	688 aa	Predicted RBP	10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	AKAP17A	Q02040	695 aa	Known RBP	10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	DPYD	Q12882	1025 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MTF1	Q14872	753 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	DCAF15	Q66K64	600 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MAGEB6	Q8N7X4	407 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	EFCC1	Q9HA90	598 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SENP2	Q9HC62	589 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PDE11A	Q9HCR9	933 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	BRMS1	Q9HCU9	246 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	VPS18	Q9P253	973 aa		10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	DDX60L	Q5H9U9	1706 aa	Known RBP	10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PLCG2	P16885	1265 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CYP7A1	P22680	504 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CASP14	P31944	242 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	GJA5	P36382	358 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PSEN1	P49768	467 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	GRIN1	Q05586	938 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SEMA3F	Q13275	785 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PICALM	Q13492	652 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	VGLL4	Q14135	290 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MCM6	Q14566	821 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PTPN21	Q16825	1174 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MIGA2	Q7L4E1	593 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	TEX11	Q8IYF3	940 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	REM2	Q8IYK8	340 aa	Predicted RBP	10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SLC35F6	Q8N357	371 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CCDC148	Q8NFR7	591 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SLC10A4	Q96EP9	437 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	WNK4	Q96J92	1243 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MYL10	Q9BUA6	226 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PUF60	Q9UHX1	559 aa	Known RBP	10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	KCNJ14	Q9UNX9	436 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	GYPC	P04921	128 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	HSPA8	P11142	646 aa	Known RBP	10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	KRT2	P35908	639 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	TM4SF4	P48230	202 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CTCF	P49711	727 aa	Predicted RBP	10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	DYNLL1	P63167	89 aa	Known RBP	10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CASP8	Q14790	479 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ZNF662	Q6ZS27	426 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	FANCB	Q8NB91	859 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PAGE5	Q96GU1	130 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	WRNIP1	Q96S55	665 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	RIOK1	Q9BRS2	568 aa	Known RBP	10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ZNF341	Q9BYN7	854 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	HAUS4	Q9H6D7	363 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ABCB6	Q9NP58	842 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ABHD10	Q9NUJ1	306 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	RMND1	Q9NWS8	449 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	RWDD2A	Q9UIY3	292 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SNCAIP	Q9Y6H5	919 aa		10.19	□□□□□ -0.78
SH3YL1-222	ENST00000479739	FLT1	P17948	1338 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MYH1	P12882	1939 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PHF20L1	A8MW92	1017 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CA12	O43570	354 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	GUCY1A2	P33402	732 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CERS3	Q8IU89	383 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ZNF654	Q8IZM8	581 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	EHBP1	Q8NDI1	1231 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PNKP	Q96T60	521 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	IRX2	Q9BZI1	471 aa	Predicted RBP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CABP5	Q9NP86	173 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	RBM28	Q9NW13	759 aa	Known RBP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SAGE1	Q9NXZ1	904 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MYO6	Q9UM54	1294 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	RRP15	Q9Y3B9	282 aa	Known RBP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	TARSL2	A2RTX5	802 aa	Known RBP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SPDYE5	A6NIY4	337 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PPP1R3G	B7ZBB8	358 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	TBC1D12	O60347	775 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SLURP2	P0DP57	97 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	TNNT3	P45378	269 aa	Predicted RBP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	AARS	P49588	968 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CKAP4	Q07065	602 aa	Known RBP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MKRN3	Q13064	507 aa	Known RBP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	NR5A1	Q13285	461 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	GRAMD1C	Q8IYS0	662 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MIGA1	Q8NAN2	632 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	OPTN	Q96CV9	577 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ZSWIM4	Q9H7M6	989 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ELP3	Q9H9T3	547 aa		10.18	□□□□□ -0.78
SH3YL1-222	ENST00000479739	DOCK1	Q14185	1865 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PHIP	Q8WWQ0	1821 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	N4BP3	O15049	544 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PRPF3	O43395	683 aa	Known RBP	10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MBD4	O95243	580 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CALM1	P0DP23	149 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CALM2	P0DP24	149 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CALM3	P0DP25	149 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	INPP5B	P32019	993 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	TRAPPC10	P48553	1259 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	TDO2	P48775	406 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	AMPD2	Q01433	879 aa		10.17	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CTDSPL2	Q05D32	466 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms