RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 HSPA9P38646 679 aaKnown RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 KRT72Q14CN4 511 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 PPP2R5BQ15173 497 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 C16orf87Q6PH81 154 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 POTEHQ6S545 545 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 POTEGQ6S5H5 508 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 PPP1R36Q96LQ0 422 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 QKIQ96PU8 341 aaKnown RBP eCLIP5.87□□□□□ -1.47
USF3-202ENST00000478658 PARVAQ9NVD7 372 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 AKR1B15C9JRZ8 316 aaPredicted RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 CTTNQ14247 550 aaKnown RBP5.87□□□□□ -1.47
USF3-202ENST00000478658 PPP4R4Q6NUP7 873 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 SPATA16Q9BXB7 569 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 ITGB1BP2Q9UKP3 347 aa5.87□□□□□ -1.47
USF3-202ENST00000478658 CARNS1A5YM72 827 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 TDRPQ86YL5 185 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 ARHGAP18Q8N392 663 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 ARMC7Q9H6L4 198 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 HERC5Q9UII4 1024 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 NDUFAB1O14561 156 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 BACH1O14867 736 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 CAPN2P17655 700 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 ARL4DP49703 201 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 CEP78Q5JTW2 689 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 HECTD3Q5T447 861 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 FRA10AC1Q70Z53 315 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 BTN2A1Q7KYR7 527 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 LRRC39Q96DD0 335 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 DEPDC7Q96QD5 511 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 DMAP1Q9NPF5 467 aaPredicted RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 FANCFQ9NPI8 374 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 MED7O43513 233 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 VPS41P49754 854 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 MTTPP55157 894 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 ABRQ12979 859 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 IZUMO3Q5VZ72 239 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 ABTB2Q8N961 1025 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 HAVCR1Q96D42 359 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 CEP95Q96GE4 821 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 SCYL1Q96KG9 808 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 TMEM237Q96Q45 408 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 SH3GL2Q99962 352 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 SYBUQ9NX95 663 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 DACT1Q9NYF0 836 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 CCDC141Q6ZP82 1450 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 A6NJR5 290 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 H3BMM5 538 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 PSMD11O00231 422 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 PGM3O95394 542 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 RPN1P04843 607 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 GNPTABQ3T906 1256 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 RRAGBQ5VZM2 374 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 DUS1LQ6P1R4 473 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 BTNL9Q6UXG8 535 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 KRT26Q7Z3Y9 468 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 WDR75Q8IWA0 830 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 ZBTB8OSQ8IWT0 167 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 VPS33AQ96AX1 596 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 RMND5BQ96G75 393 aaPredicted RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 NAPGQ99747 312 aaPredicted RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 TACO1Q9BSH4 297 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 PRDM10Q9NQV6 1147 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 TBC1D8O95759 1140 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 FAM107AO95990 144 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 ZSCAN20P17040 1043 aaPredicted RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 IDI1Q13907 227 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 KLHL12Q53G59 568 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 SLC10A5Q5PT55 438 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 NXNQ6DKJ4 435 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 ZBED2Q9BTP6 218 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 ANKRD2Q9GZV1 360 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 CCDC134Q9H6E4 229 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 HCN3Q9P1Z3 774 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 HPCAL4Q9UM19 191 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 SF3B1O75533 1304 aaKnown RBP eCLIP5.86□□□□□ -1.47
USF3-202ENST00000478658 CREB3O43889 395 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 RANBP6O60518 1105 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 NBNO60934 754 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 IDH1O75874 414 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 DCTN3O75935 186 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 ATP5HO75947 161 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 CAV3P56539 151 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 DHX32Q7L7V1 743 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 PLA2G4DQ86XP0 818 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 USHBP1Q8N6Y0 703 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 C18orf25Q96B23 403 aaPredicted RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 PRKD2Q9BZL6 878 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 KCNH3Q9ULD8 1083 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 LDHAP00338 332 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 SLC4A1P02730 911 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 LRPAP1P30533 357 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 INPP5BP32019 993 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 LSP1P33241 339 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 MCM7P33993 719 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 IARSP41252 1262 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 PAPOLAP51003 745 aaKnown RBP5.86□□□□□ -1.47
USF3-202ENST00000478658 RAD23BP54727 409 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 HDGFL1Q5TGJ6 251 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 CCDC80Q76M96 950 aa5.86□□□□□ -1.47
USF3-202ENST00000478658 CCDC127Q96BQ5 260 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms