RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 GRM5P41594 1212 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ECE1P42892 770 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 TM4SF4P48230 202 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 CLK1P49759 484 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 USP14P54578 494 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 IL2P60568 153 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 PPP2R2AP63151 447 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 G3BP1Q13283 466 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SEPT7Q16181 437 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 NBPF8Q3BBV2 869 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ATP13A4Q4VNC1 1196 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 RRP12Q5JTH9 1297 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 IFIT1BQ5T764 474 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 VPS53Q5VIR6 699 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ARMC3Q5W041 872 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 CDCA2Q69YH5 1023 aaPredicted RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 LLGL2Q6P1M3 1020 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 TLDC1Q6P9B6 456 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 PGM2L1Q6PCE3 622 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 LRRC69Q6ZNQ3 347 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 BICDL1Q6ZP65 573 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 BRAPQ7Z569 592 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SKAP1Q86WV1 359 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 NCAPG2Q86XI2 1143 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SLC41A1Q8IVJ1 513 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SLFN12Q8IYM2 578 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 CMTR2Q8IYT2 770 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 CBARPQ8N350 705 aaPredicted RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ZNF280CQ8ND82 737 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 GSTCDQ8NEC7 633 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 C1orf162Q8NEQ5 155 aaPredicted RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 AFAP1L1Q8TED9 768 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 PTPRN2Q92932 1015 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ZNF622Q969S3 477 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ZBTB10Q96DT7 871 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ZNF496Q96IT1 587 aaPredicted RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 STAC3Q96MF2 364 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 FAM193BQ96PV7 902 aaPredicted RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 MYCBPQ99417 103 aaPredicted RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SEC62Q99442 399 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 OSMRQ99650 979 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 EIF2AK1Q9BQI3 630 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 NUDT16L1Q9BRJ7 211 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 AP1M1Q9BXS5 423 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SLC26A6Q9BXS9 759 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 WDR12Q9GZL7 423 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 KMT5AQ9NQR1 393 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 AAASQ9NRG9 546 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SMC4Q9NTJ3 1288 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 MKS1Q9NXB0 559 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SAGE1Q9NXZ1 904 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 GMIPQ9P107 970 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 DDX20Q9UHI6 824 aaKnown RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 GJD2Q9UKL4 321 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ZNF214Q9UL59 606 aaPredicted RBP3.38□□□□□ -1.87
HMGN4-202ENST00000477243 USP20Q9Y2K6 914 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ZKSCAN5Q9Y2L8 839 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 TMEM98Q9Y2Y6 226 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 PCDHGB3Q9Y5G1 929 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 SPHKAPQ2M3C7 1700 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 MAGI3Q5TCQ9 1506 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 ARAP3Q8WWN8 1544 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 LTBP3Q9NS15 1303 aa3.38□□□□□ -1.87
HMGN4-202ENST00000477243 WDR97A6NE52 1622 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 MYO9AB2RTY4 2548 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 A0A096LPE4 126 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 A0A1W2PPZ6 126 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 TPP1O14773 563 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 TNFRSF10CO14798 259 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 PRODHO43272 600 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 AP1G1O43747 822 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 PAGE1O75459 146 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 FKBP9O95302 570 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 BAG2O95816 211 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 ADH1AP07327 375 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 POTEJP0CG39 1038 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 NME1P15531 152 aaKnown RBP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 CAPN3P20807 821 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 CHKAP35790 457 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 CAP2P40123 477 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 TSPAN7P41732 249 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 CCR10P46092 362 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 ID4P47928 161 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 SESN3P58005 492 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 COPS2P61201 443 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 ERVK-21P61565 698 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 GALEQ14376 348 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 PSMD6Q15008 389 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 PCBP2Q15366 365 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 DGKKQ5KSL6 1271 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 YOD1Q5VVQ6 348 aaPredicted RBP3.37□□□□□ -1.87
HMGN4-202ENST00000477243 CDCP2Q5VXM1 449 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 DMRTA1Q5VZB9 504 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 SWSAP1Q6NVH7 229 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 FAM180BQ6P0A1 224 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 CYP26C1Q6V0L0 522 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 FKBP9P1Q75LS8 142 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 NLRC3Q7RTR2 1065 aa3.37□□□□□ -1.87
HMGN4-202ENST00000477243 MAMDC2Q7Z304 686 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms