RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	PTPRE	P23469	700 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	IRX1	P78414	480 aa	Predicted RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	PAK1	Q13153	545 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	RPS6KA1	Q15418	735 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TTC19	Q6DKK2	380 aa	Predicted RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	OXER1	Q8TDS5	423 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	AGXT2	Q9BYV1	514 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	EPC1	Q9H2F5	836 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	NOP53	Q9NZM5	478 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	CASP14	P31944	242 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	DYNLL1	P63167	89 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	CCDC84	Q86UT8	332 aa	Predicted RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	METTL16	Q86W50	562 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	NME8	Q8N427	588 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SETDB2	Q96T68	719 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	JPH2	Q9BR39	696 aa	Predicted RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	CACYBP	Q9HB71	228 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	CACNA1F	O60840	1977 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	GUCY2C	P25092	1073 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	LONP1	P36776	959 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	NAPA	P54920	295 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TRIM58	Q8NG06	486 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	PAWR	Q96IZ0	340 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	EPS15L1	Q9UBC2	864 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SRPRB	Q9Y5M8	271 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	C1orf167	Q5SNV9	1468 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	KDM6A	O15550	1401 aa	Predicted RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SART1	O43290	800 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TCP1	P17987	556 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TNFAIP3	P21580	790 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	EEF1D	P29692	281 aa	Known RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	NEK2	P51955	445 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	LETM2	Q2VYF4	491 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	NYAP1	Q6ZVC0	841 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	ILDR1	Q86SU0	546 aa	Predicted RBP	6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	GPIHBP1	Q8IV16	184 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	NELFB	Q8WX92	580 aa		6.68	□□□□□ -1.34
HNRNPU-208	ENST00000475997	FRMD3	A2A2Y4	597 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SOWAHD	A6NJG2	315 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	GSG1L2	A8MUP6	293 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SLFN14	P0C7P3	912 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	PRR29	P0C7W0	189 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	HIBADH	P31937	336 aa	Known RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SERPINB6	P35237	376 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	IL6ST	P40189	918 aa	Predicted RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SESN3	P58005	492 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	RBL2	Q08999	1139 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	BIRC2	Q13490	618 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	RAPGEF1	Q13905	1077 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	RPS6KA2	Q15349	733 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	LIN9	Q5TKA1	542 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	ZNF354C	Q86Y25	554 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	IGDCC4	Q8TDY8	1250 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	KLHL29	Q96CT2	875 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	RUNDC3B	Q96NL0	473 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	NOC4L	Q9BVI4	516 aa	Known RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	RNF26	Q9BY78	433 aa	Predicted RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	ANGPTL2	Q9UKU9	493 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	PHLPP2	Q6ZVD8	1323 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	MAP3K7	O43318	606 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	PHB	P35232	272 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	RAP1GDS1	P52306	607 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TFAP4	Q01664	338 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SUSD4	Q5VX71	490 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	USP49	Q70CQ1	688 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	BRINP3	Q76B58	766 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	IWS1	Q96ST2	819 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	MRPL46	Q9H2W6	279 aa	Known RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TXLNG	Q9NUQ3	528 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	MROH7-TTC4	A0A0A0MT08	1334 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	AKAP12	Q02952	1782 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	LMNA	P02545	664 aa	Known RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	CSF1R	P07333	972 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	PNMA6A	P0CW24	399 aa	Predicted RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	ATIC	P31939	592 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	OCA2	Q04671	838 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	E2F5	Q15329	346 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TERF2	Q15554	542 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SGMS1	Q86VZ5	419 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	CCDC89	Q8N998	374 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	RRP36	Q96EU6	259 aa	Known RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	CCDC138	Q96M89	665 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	AGTPBP1	Q9UPW5	1226 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	WDR19	Q8NEZ3	1342 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TOGARAM2	Q6ZUX3	1019 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	CERS3	Q8IU89	383 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	CSGALNACT2	Q8N6G5	542 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	GSDMA	Q96QA5	445 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	NAP1L4	Q99733	375 aa	Known RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TYW1	Q9NV66	732 aa	Known RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	AFG3L2	Q9Y4W6	797 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	SAMM50	Q9Y512	469 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	MORC2	Q9Y6X9	1032 aa	Predicted RBP	6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	NRXN3	Q9Y4C0	1643 aa		6.67	□□□□□ -1.34
HNRNPU-208	ENST00000475997	POTEB3	A0JP26	581 aa		6.66	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TEX33	O43247	280 aa		6.66	□□□□□ -1.34
HNRNPU-208	ENST00000475997	E2F4	Q16254	413 aa		6.66	□□□□□ -1.34
HNRNPU-208	ENST00000475997	POTEB	Q6S5H4	581 aa		6.66	□□□□□ -1.34
HNRNPU-208	ENST00000475997	TRIM42	Q8IWZ5	723 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms