RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	GDPD5	Q8WTR4	605 aa		11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345	FAM227B	Q96M60	508 aa		11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345	FSD1	Q9BTV5	496 aa		11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345		A0A0D9SFI3	127 aa		11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	ORC4	O43929	436 aa		11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	RANBP6	O60518	1105 aa	Known RBP	11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	PDHB	P11177	359 aa		11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	WDR5	P61964	334 aa	Known RBP	11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	MBTPS1	Q14703	1052 aa		11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	DCAF4	Q8WV16	495 aa		11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	ZNF287	Q9HBT7	754 aa		11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	POLR3E	Q9NVU0	708 aa		11.37	□□□□□ -0.59
MCF2L-223	ENST00000473345	TTC41P	Q6P2S7	1318 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	PITPNM1	O00562	1244 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	FGA	P02671	866 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	GOLGA8H	P0CJ92	632 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	SNHG28	P0DPA3	235 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	ZNF200	P98182	395 aa	Predicted RBP	11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	ARHGAP1	Q07960	439 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	ZNF543	Q08ER8	600 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	MKRN4P	Q13434	485 aa	Predicted RBP	11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	LY6K	Q17RY6	165 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	TRIM71	Q2Q1W2	868 aa	Known RBP	11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	NFRKB	Q6P4R8	1299 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	TBC1D10C	Q8IV04	446 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	AFG1L	Q8WV93	481 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	FAM122A	Q96E09	287 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	SLC9A7	Q96T83	725 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	SEZ6L	Q9BYH1	1024 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	NACAP1	Q9BZK3	213 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	SUGCT	Q9HAC7	445 aa		11.36	□□□□□ -0.59
MCF2L-223	ENST00000473345	PFKM	P08237	780 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	MMP3	P08254	477 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	SUPT20HL2	P0C7V6	817 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	TXN	P10599	105 aa	Known RBP	11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	TOP1	P11387	765 aa	Known RBP	11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	CPT1A	P50416	773 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	CHMP4BP1	P59074	171 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	HAND2	P61296	217 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	PPP2R5B	Q15173	497 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	RRP12	Q5JTH9	1297 aa	Known RBP	11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	RNF207	Q6ZRF8	634 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	PHOSPHO2	Q8TCD6	241 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	TAAR1	Q96RJ0	339 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	UBA5	Q9GZZ9	404 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	MTUS1	Q9ULD2	1270 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	NEDD4	P46934	1319 aa		11.35	□□□□□ -0.59
MCF2L-223	ENST00000473345	OPLAH	O14841	1288 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	CXCL10	P02778	98 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	MX1	P20591	662 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	RFC2	P35250	354 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	ALX1	Q15699	326 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	PTGIS	Q16647	500 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	USH1G	Q495M9	461 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	IL27	Q8NEV9	243 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	ANKS1A	Q92625	1134 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	HLA-C	Q95604	372 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	GPATCH3	Q96I76	525 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	ZKSCAN3	Q9BRR0	538 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	C1QTNF1	Q9BXJ1	281 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	TCP11L1	Q9NUJ3	509 aa		11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	ADD3	Q9UEY8	706 aa	Known RBP	11.34	□□□□□ -0.59
MCF2L-223	ENST00000473345	LINC01553	A4QN01	128 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	GTPBP6	O43824	516 aa	Predicted RBP	11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	SLC3A2	P08195	630 aa	Known RBP	11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	HSPD1	P10809	573 aa	Known RBP	11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	CKB	P12277	381 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	PDE4D	Q08499	809 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	RBL2	Q08999	1139 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	SLC35G1	Q2M3R5	365 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	SEPT14	Q6ZU15	432 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	SESTD1	Q86VW0	696 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	SCFD2	Q8WU76	684 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	BCAS3	Q9H6U6	928 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	HDAC6	Q9UBN7	1215 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	TELO2	Q9Y4R8	837 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	WDR19	Q8NEZ3	1342 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	NCOR1	O75376	2440 aa		11.33	□□□□□ -0.6
MCF2L-223	ENST00000473345	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	LOC102724159	A0A0B4J2E5	919 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	HAS3	O00219	553 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	NKRF	O15226	690 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	SORBS3	O60504	671 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	RGS20	O76081	388 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	BAIAP3	O94812	1187 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	GJB5	O95377	273 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	ZNF286B	P0CG31	522 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	ACTN1	P12814	892 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	IL9	P15248	144 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	PTPN11	Q06124	597 aa	Predicted RBP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	NMI	Q13287	307 aa	Predicted RBP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	PWP2	Q15269	919 aa	Known RBP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	FAM117B	Q6P1L5	589 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	LRRC8D	Q7L1W4	858 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	CHST3	Q7LGC8	479 aa		11.32	□□□□□ -0.6

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