RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 RPS6P62753 249 aaKnown RBP22.79■■□□□ 1.24
APTX-218ENST00000473270 PURAQ00577 322 aaKnown RBP22.79■■□□□ 1.24
APTX-218ENST00000473270 TTLL4Q14679 1199 aa22.79■■□□□ 1.24
APTX-218ENST00000473270 SLC30A10Q6XR72 485 aa22.79■■□□□ 1.24
APTX-218ENST00000473270 ATXN2LQ8WWM7 1075 aaKnown RBP22.79■■□□□ 1.24
APTX-218ENST00000473270 CXXC1Q9P0U4 656 aaPredicted RBP22.79■■□□□ 1.24
APTX-218ENST00000473270 THEGQ9P2T0 379 aa22.79■■□□□ 1.24
APTX-218ENST00000473270 GRIN2DO15399 1336 aa22.79■■□□□ 1.24
APTX-218ENST00000473270 UMODL1Q5DID0 1318 aa22.79■■□□□ 1.24
APTX-218ENST00000473270 DHX16O60231 1041 aaKnown RBP22.78■■□□□ 1.24
APTX-218ENST00000473270 TXNP10599 105 aaKnown RBP22.78■■□□□ 1.24
APTX-218ENST00000473270 ATP2A2P16615 1042 aaKnown RBP22.78■■□□□ 1.24
APTX-218ENST00000473270 CHMP4BP1P59074 171 aa22.78■■□□□ 1.24
APTX-218ENST00000473270 USH1GQ495M9 461 aa22.78■■□□□ 1.24
APTX-218ENST00000473270 SCLYQ96I15 445 aa22.78■■□□□ 1.24
APTX-218ENST00000473270 KAT14Q9H8E8 782 aa22.78■■□□□ 1.24
APTX-218ENST00000473270 TRMT13Q9NUP7 481 aaKnown RBP22.78■■□□□ 1.24
APTX-218ENST00000473270 RBM47A0AV96 593 aaKnown RBP22.77■■□□□ 1.24
APTX-218ENST00000473270 EIF5BO60841 1220 aaKnown RBP22.77■■□□□ 1.24
APTX-218ENST00000473270 PTGS1P23219 599 aa22.77■■□□□ 1.24
APTX-218ENST00000473270 RFC2P35250 354 aa22.77■■□□□ 1.24
APTX-218ENST00000473270 BFSP2Q13515 415 aa22.77■■□□□ 1.24
APTX-218ENST00000473270 CCDC85BQ15834 202 aaPredicted RBP22.77■■□□□ 1.24
APTX-218ENST00000473270 DEFB128Q7Z7B8 93 aa22.77■■□□□ 1.24
APTX-218ENST00000473270 CCDC155Q8N6L0 562 aa22.77■■□□□ 1.24
APTX-218ENST00000473270 DSCC1Q9BVC3 393 aa22.77■■□□□ 1.24
APTX-218ENST00000473270 FTOQ9C0B1 505 aaKnown RBP eCLIP22.77■■□□□ 1.24
APTX-218ENST00000473270 PCDHA11Q9Y5I1 949 aa22.77■■□□□ 1.24
APTX-218ENST00000473270 CDH23Q9H251 3354 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 CYP2C9P11712 490 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 NBPF20Q3BBV1 942 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 TMEM63BQ5T3F8 832 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 NFRKBQ6P4R8 1299 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 DGKHQ86XP1 1220 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 MCF2L2Q86YR7 1114 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 USP38Q8NB14 1042 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 CLEC4DQ8WXI8 215 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 MAF1Q9H063 256 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 WNT8AQ9H1J5 351 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 PRDM6Q9NQX0 595 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 PRUNE2Q8WUY3 3088 aa22.76■■□□□ 1.23
APTX-218ENST00000473270 KIF28PB7ZC32 967 aa22.75■■□□□ 1.23
APTX-218ENST00000473270 TNFRSF10AO00220 468 aa22.75■■□□□ 1.23
APTX-218ENST00000473270 MRPS5P82675 430 aaKnown RBP22.75■■□□□ 1.23
APTX-218ENST00000473270 PTPN11Q06124 597 aaPredicted RBP22.75■■□□□ 1.23
APTX-218ENST00000473270 TMEM67Q5HYA8 995 aa22.75■■□□□ 1.23
APTX-218ENST00000473270 RGS22Q8NE09 1264 aa22.75■■□□□ 1.23
APTX-218ENST00000473270 IL25Q9H293 177 aa22.75■■□□□ 1.23
APTX-218ENST00000473270 CTNNA3Q9UI47 895 aa22.75■■□□□ 1.23
APTX-218ENST00000473270 LRRC37A2A6NM11 1700 aa22.74■■□□□ 1.23
APTX-218ENST00000473270 GTPBP6O43824 516 aaPredicted RBP22.74■■□□□ 1.23
APTX-218ENST00000473270 RABGGTBP53611 331 aa22.74■■□□□ 1.23
APTX-218ENST00000473270 MICALL1Q8N3F8 863 aa22.74■■□□□ 1.23
APTX-218ENST00000473270 PNMA1Q8ND90 353 aa22.74■■□□□ 1.23
APTX-218ENST00000473270 NSUN6Q8TEA1 469 aaKnown RBP22.74■■□□□ 1.23
APTX-218ENST00000473270 ZKSCAN3Q9BRR0 538 aa22.74■■□□□ 1.23
APTX-218ENST00000473270 ABCB11O95342 1321 aa22.74■■□□□ 1.23
APTX-218ENST00000473270 A6NJR5 290 aa22.73■■□□□ 1.23
APTX-218ENST00000473270 PITPNM1O00562 1244 aa22.73■■□□□ 1.23
APTX-218ENST00000473270 GOLGA8HP0CJ92 632 aa22.73■■□□□ 1.23
APTX-218ENST00000473270 SNHG28P0DPA3 235 aa22.73■■□□□ 1.23
APTX-218ENST00000473270 IMMTQ16891 758 aaKnown RBP22.73■■□□□ 1.23
APTX-218ENST00000473270 ANO2Q9NQ90 1003 aa22.73■■□□□ 1.23
APTX-218ENST00000473270 YBX2Q9Y2T7 364 aaKnown RBP22.73■■□□□ 1.23
APTX-218ENST00000473270 REC8O95072 547 aa22.72■■□□□ 1.23
APTX-218ENST00000473270 SKIV2LQ15477 1246 aaKnown RBP22.72■■□□□ 1.23
APTX-218ENST00000473270 STXBP2Q15833 593 aa22.72■■□□□ 1.23
APTX-218ENST00000473270 CDC37Q16543 378 aaPredicted RBP22.72■■□□□ 1.23
APTX-218ENST00000473270 AAK1Q2M2I8 961 aa22.72■■□□□ 1.23
APTX-218ENST00000473270 ASPRV1Q53RT3 343 aa22.72■■□□□ 1.23
APTX-218ENST00000473270 TBC1D10CQ8IV04 446 aa22.72■■□□□ 1.23
APTX-218ENST00000473270 ASB2Q96Q27 587 aa22.72■■□□□ 1.23
APTX-218ENST00000473270 SLC9A7Q96T83 725 aa22.72■■□□□ 1.23
APTX-218ENST00000473270 UBAC1Q9BSL1 405 aa22.72■■□□□ 1.23
APTX-218ENST00000473270 UBA5Q9GZZ9 404 aa22.72■■□□□ 1.23
APTX-218ENST00000473270 MRPL11Q9Y3B7 192 aaKnown RBP22.72■■□□□ 1.23
APTX-218ENST00000473270 U3KPZ7 1027 aaPredicted RBP22.72■■□□□ 1.23
APTX-218ENST00000473270 KDM4AO75164 1064 aa22.71■■□□□ 1.23
APTX-218ENST00000473270 GH1P01241 217 aa22.71■■□□□ 1.23
APTX-218ENST00000473270 CASTP20810 708 aaKnown RBP22.71■■□□□ 1.23
APTX-218ENST00000473270 EDNRBP24530 442 aa22.71■■□□□ 1.23
APTX-218ENST00000473270 KCNJ6P48051 423 aa22.71■■□□□ 1.23
APTX-218ENST00000473270 SEPT14Q6ZU15 432 aa22.71■■□□□ 1.23
APTX-218ENST00000473270 IWS1Q96ST2 819 aa22.71■■□□□ 1.23
APTX-218ENST00000473270 VCANP13611 3396 aa22.71■■□□□ 1.23
APTX-218ENST00000473270 PARP1P09874 1014 aaKnown RBP22.7■■□□□ 1.22
APTX-218ENST00000473270 ARHGEF16Q5VV41 709 aa22.7■■□□□ 1.22
APTX-218ENST00000473270 CHST3Q7LGC8 479 aa22.7■■□□□ 1.22
APTX-218ENST00000473270 FBXO11Q86XK2 927 aa22.7■■□□□ 1.22
APTX-218ENST00000473270 PHOSPHO2Q8TCD6 241 aa22.7■■□□□ 1.22
APTX-218ENST00000473270 ZSCAN10Q96SZ4 725 aaPredicted RBP22.7■■□□□ 1.22
APTX-218ENST00000473270 RMDN3Q96TC7 470 aa22.7■■□□□ 1.22
APTX-218ENST00000473270 KRT23Q9C075 422 aa22.7■■□□□ 1.22
APTX-218ENST00000473270 CNNM2Q9H8M5 875 aa22.7■■□□□ 1.22
APTX-218ENST00000473270 NEDD4P46934 1319 aa22.7■■□□□ 1.22
APTX-218ENST00000473270 PTH1RQ03431 593 aa22.69■■□□□ 1.22
APTX-218ENST00000473270 ADGRE1Q14246 886 aa22.69■■□□□ 1.22
APTX-218ENST00000473270 PTGISQ16647 500 aa22.69■■□□□ 1.22
APTX-218ENST00000473270 ADGRF4Q8IZF3 695 aa22.69■■□□□ 1.22
APTX-218ENST00000473270 CAGE1Q8TC20 777 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms