RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	PCDHB6	Q9Y5E3	794 aa		12	□□□□□ -0.49
PUM1-208	ENST00000471894	PFAS	O15067	1338 aa		12	□□□□□ -0.49
PUM1-208	ENST00000471894	CCNT1	O60563	726 aa	Known RBP	11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	BCR	P11274	1271 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	MCM7	P33993	719 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	ZNF76	P36508	570 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	SREBF1	P36956	1147 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	C1QTNF8	P60827	252 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	ARHGAP4	P98171	946 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	KCTD2	Q14681	263 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	STK38	Q15208	465 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	ARHGEF16	Q5VV41	709 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	RMDN3	Q96TC7	470 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	NAP1L4	Q99733	375 aa	Known RBP	11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	GDPD2	Q9HCC8	539 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	POLR3E	Q9NVU0	708 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	RCOR1	Q9UKL0	485 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	IVNS1ABP	Q9Y6Y0	642 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	ADGRA2	Q96PE1	1338 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	MYH7B	A7E2Y1	1941 aa		11.99	□□□□□ -0.49
PUM1-208	ENST00000471894	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	POTEB2	H3BUK9	544 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	WNT7A	O00755	349 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	STRN	O43815	780 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	YEATS4	O95619	227 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	BMP15	O95972	392 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	HSPA6	P17066	643 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	MAPK4	P31152	587 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	NASP	P49321	788 aa	Predicted RBP	11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	UBXN2A	P68543	259 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	SLC39A14	Q15043	492 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	LINC00301	Q8NCQ3	95 aa		11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	NSUN6	Q8TEA1	469 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	LEO1	Q8WVC0	666 aa	Predicted RBP	11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	PURB	Q96QR8	312 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-208	ENST00000471894	SPTLC2	O15270	562 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	EDIL3	O43854	480 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	PRPF40A	O75400	957 aa	Known RBP	11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	TRPA1	O75762	1119 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	ECM2	O94769	699 aa	Predicted RBP	11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	TBC1D8	O95759	1140 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	CYP3A4	P08684	503 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	GCFC2	P16383	781 aa	Known RBP	11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	EIF2AK2	P19525	551 aa	Known RBP	11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	MCM4	P33991	863 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	CNTN2	Q02246	1040 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	PTGDR	Q13258	359 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	PTPA	Q15257	358 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	PPP4R3A	Q6IN85	833 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	GPR142	Q7Z601	462 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	PLEKHH3	Q7Z736	793 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	DNER	Q8NFT8	737 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	KCNG4	Q8TDN1	519 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	PXMP2	Q9NR77	195 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	RNF186	Q9NXI6	227 aa		11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	ADD3	Q9UEY8	706 aa	Known RBP	11.97	□□□□□ -0.49
PUM1-208	ENST00000471894	RPTOR	Q8N122	1335 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	MARCH6	O60337	910 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	TDP2	O95551	362 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	PGK2	P07205	417 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	NR3C2	P08235	984 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	MYCL	P12524	364 aa	Predicted RBP	11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	PTPRE	P23469	700 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	CYP3A7	P24462	503 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	MARCKS	P29966	332 aa	Predicted RBP	11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	CIITA	P33076	1130 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	ME1	P48163	572 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	ORC2	Q13416	577 aa	Predicted RBP	11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	PGM5	Q15124	567 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	TPRN	Q4KMQ1	711 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	PCNX4	Q63HM2	1172 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	MOXD1	Q6UVY6	613 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	ABRA	Q8N0Z2	381 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	JMY	Q8N9B5	988 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	CRYGN	Q8WXF5	182 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	PDCD2L	Q9BRP1	358 aa		11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	DDX25	Q9UHL0	483 aa	Known RBP	11.96	□□□□□ -0.49
PUM1-208	ENST00000471894	DNAJC25-GNG10	A0A024R161	153 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	GOLGA6L4	A6NEF3	574 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	SOWAHB	A6NEL2	793 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	SLC15A5	A6NIM6	579 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	DDX11L8	A8MPP1	907 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894		B4DLN1	442 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	NEMF	O60524	1076 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	PPP6R2	O75170	966 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	ADORA2A	P29274	412 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	CCND2	P30279	289 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	ALDH5A1	P51649	535 aa	Predicted RBP	11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	ATP2C1	P98194	919 aa	Predicted RBP	11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	NFKBIB	Q15653	356 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	PRR16	Q569H4	304 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	XRRA1	Q6P2D8	792 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	DPP9	Q86TI2	863 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	C4orf32	Q8N8J7	132 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	FAM133A	Q8N9E0	248 aa		11.95	□□□□□ -0.5
PUM1-208	ENST00000471894	TMEM87A	Q8NBN3	555 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms