RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 PTPN18Q99952 460 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 YIPF2Q9BWQ6 316 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 NRSN2Q9GZP1 204 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.87□□□□□ -1.63
LRCH3-213ENST00000471667 ZNF576Q9H609 170 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 PAK6Q9NQU5 681 aaPredicted RBP4.87□□□□□ -1.63
LRCH3-213ENST00000471667 CCDC39Q9UFE4 941 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 PPP2R3BQ9Y5P8 575 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 NCOR1O75376 2440 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 CHD8Q9HCK8 2581 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 ZDBF2Q9HCK1 2354 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 BDP1A6H8Y1 2624 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 BAHCC1Q9P281 2608 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 FYB1O15117 783 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 CYP26A1O43174 497 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 MYO1BO43795 1136 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 POLR3DP05423 398 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-213ENST00000471667 ADH5P11766 374 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 PCDH1Q08174 1060 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 NFXL1Q6ZNB6 911 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 ZAR1Q86SH2 424 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 VSIG10LQ86VR7 867 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 GJD3Q8N144 294 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 EZH1Q92800 747 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-213ENST00000471667 TIFAQ96CG3 184 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 CLMNQ96JQ2 1002 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 RNPC3Q96LT9 517 aaKnown RBP4.86□□□□□ -1.63
LRCH3-213ENST00000471667 TBC1D32Q96NH3 1257 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 COG5Q9UP83 839 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 SCAF8Q9UPN6 1271 aaKnown RBP4.86□□□□□ -1.63
LRCH3-213ENST00000471667 CSADQ9Y600 493 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 HEG1Q9ULI3 1381 aa4.86□□□□□ -1.63
LRCH3-213ENST00000471667 LAMA2P24043 3122 aaKnown RBP4.85□□□□□ -1.63
LRCH3-213ENST00000471667 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-213ENST00000471667 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-213ENST00000471667 LOC105371045A0A1W2PR82 267 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 FAM170BA6NMN3 283 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 A1BGP04217 495 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 U2AF1L5P0DN76 240 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-213ENST00000471667 MAOBP27338 520 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 U2AF1Q01081 240 aaKnown RBP eCLIP4.85□□□□□ -1.63
LRCH3-213ENST00000471667 TEFQ10587 303 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 SHHQ15465 462 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 ZNF423Q2M1K9 1284 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 KIF6Q6ZMV9 814 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 CCDC129Q6ZRS4 1044 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 CCNJLQ8IV13 435 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 TP53INP2Q8IXH6 220 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 FAM43AQ8N2R8 423 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 BRI3BPQ8WY22 251 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 HERVK_113Q902F9 699 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 CLEC4MQ9H2X3 399 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-213ENST00000471667 BSDC1Q9NW68 430 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-213ENST00000471667 MTMR7Q9Y216 660 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 ACTL7BQ9Y614 415 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 ABCC4O15439 1325 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 MYO3BQ8WXR4 1341 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 ABCC12Q96J65 1359 aa4.85□□□□□ -1.63
LRCH3-213ENST00000471667 IBTKQ9P2D0 1353 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-213ENST00000471667 SSC5DA1L4H1 1573 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 RTL9Q8NET4 1388 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 A0A096LPE4 126 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 A0A1W2PPZ6 126 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 TNPO2O14787 897 aaKnown RBP4.84□□□□□ -1.63
LRCH3-213ENST00000471667 ERC2O15083 957 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 RNMTO43148 476 aaKnown RBP4.84□□□□□ -1.63
LRCH3-213ENST00000471667 CYP11A1P05108 521 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 NFICP08651 508 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 RAB6AP20340 208 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 KCNQ1P51787 676 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 SNAPC2Q13487 334 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 GRAPQ13588 217 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 EIF4A2Q14240 407 aaKnown RBP4.84□□□□□ -1.63
LRCH3-213ENST00000471667 PKN1Q16512 942 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 NBPF9Q3BBW0 867 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 CCDC174Q6PII3 467 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 CBLL1Q75N03 491 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 GRAPLQ8TC17 118 aaPredicted RBP4.84□□□□□ -1.63
LRCH3-213ENST00000471667 GATA6Q92908 595 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 COA7Q96BR5 231 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 PARK7Q99497 189 aaKnown RBP4.84□□□□□ -1.63
LRCH3-213ENST00000471667 DEFB129Q9H1M3 183 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 CPA4Q9UI42 421 aa4.84□□□□□ -1.63
LRCH3-213ENST00000471667 A0A1W2PP55 124 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 WNT10BO00744 389 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 ABL1P00519 1130 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 HMGCRP04035 888 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 CTSBP07858 339 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 GRIA4P48058 902 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 FLT3LGP49771 235 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 MAP7Q14244 749 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 POU4F3Q15319 338 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 ST3GAL2Q16842 350 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 SPRED3Q2MJR0 410 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 HP1BP3Q5SSJ5 553 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-213ENST00000471667 DUSP27Q5VZP5 1158 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 PHLDB3Q6NSJ2 640 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 ZNF790Q6PG37 636 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 C17orf99Q6UX52 265 aa4.83□□□□□ -1.64
LRCH3-213ENST00000471667 DGLUCYQ7Z3D6 616 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms