RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 INO80BQ9C086 356 aaPredicted RBP10.44□□□□□ -0.74
UBE3C-205ENST00000470408 RIMS1Q86UR5 1692 aaKnown RBP10.44□□□□□ -0.74
UBE3C-205ENST00000470408 ENTPD3O75355 529 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 CAMTA2O94983 1202 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 MMP1P03956 469 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 ZNF75DP51815 510 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 ZNF589Q86UQ0 364 aaPredicted RBP10.44□□□□□ -0.74
UBE3C-205ENST00000470408 GH2P01242 217 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 RFX1P22670 979 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 ATP5DP30049 168 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 ALDH3A1P30838 453 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 DNAJC21Q5F1R6 531 aaKnown RBP10.44□□□□□ -0.74
UBE3C-205ENST00000470408 CFAP58Q5T655 872 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 ZNF365Q70YC5 407 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 TCP11Q8WWU5 503 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 MYO3AQ8NEV4 1616 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 CUL4AQ13619 759 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 MAPK8IP1Q9UQF2 711 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 BZW2Q9Y6E2 419 aaKnown RBP10.44□□□□□ -0.74
UBE3C-205ENST00000470408 CPS1P31327 1500 aa10.44□□□□□ -0.74
UBE3C-205ENST00000470408 ORC4O43929 436 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 RPN1P04843 607 aaKnown RBP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 GPSM2P81274 684 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 NECTIN1Q15223 517 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 EPHA10Q5JZY3 1008 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 RNF207Q6ZRF8 634 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 NAPGQ99747 312 aaPredicted RBP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 TAB2Q9NYJ8 693 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 TBC1D7Q9P0N9 293 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 ZSCAN20P17040 1043 aaPredicted RBP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 SPATA1Q5VX52 437 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 PRR5LQ6MZQ0 368 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 TBCKQ8TEA7 893 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 SECISBP2LQ93073 1101 aaKnown RBP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 CBX8Q9HC52 389 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 ZNF277Q9NRM2 450 aaPredicted RBP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 TBC1D22BQ9NU19 505 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 SEPT9Q9UHD8 586 aaPredicted RBP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 PXDNLA1KZ92 1463 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 E7EVH7 732 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 ZBTB5O15062 677 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 CPLX4Q7Z7G2 160 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 RASEFQ8IZ41 740 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 OR8K1Q8NGG5 319 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 WRNIP1Q96S55 665 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 SAMD15Q9P1V8 674 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 KIAA1024Q9UPX6 916 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 LRRC7Q96NW7 1537 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 PSDA5PKW4 1024 aaPredicted RBP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 RHOXF2BP0C7M4 288 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 STXBP2Q15833 593 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 HHIPL2Q6UWX4 724 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 SND1Q7KZF4 910 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 SH3RF3Q8TEJ3 882 aaPredicted RBP10.43□□□□□ -0.74
UBE3C-205ENST00000470408 RHOXF2Q9BQY4 288 aa10.43□□□□□ -0.74
UBE3C-205ENST00000470408 ARHGAP25P42331 645 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 CYP2J2P51589 502 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 SEMA3FQ13275 785 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 HADHQ16836 314 aaKnown RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 TBC1D10BQ4KMP7 808 aaPredicted RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 KCNV1Q6PIU1 500 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 PI16Q6UXB8 463 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 PRPF38AQ8NAV1 312 aaKnown RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 FAM84BQ96KN1 310 aaPredicted RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 TDRD3Q9H7E2 651 aaKnown RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 DCP1AQ9NPI6 582 aaPredicted RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 LZTFL1Q9NQ48 299 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 LMBRD1Q9NUN5 540 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 LRFN2Q9ULH4 789 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 PREX1Q8TCU6 1659 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 GOLGA6CA6NDK9 693 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 GOLGA6BA6NDN3 693 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 CSF1RP07333 972 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 GOLGA6DP0CG33 693 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 PTPREP23469 700 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 INPP5BP32019 993 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 FOXO4P98177 505 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 HDLBPQ00341 1268 aaKnown RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 ADAM9Q13443 819 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 MORC3Q14149 939 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 KARSQ15046 597 aaKnown RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 TMTC3Q6ZXV5 915 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 METTL23Q86XA0 190 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 CMTR1Q8N1G2 835 aaKnown RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 TBC1D16Q8TBP0 767 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 NSUN6Q8TEA1 469 aaKnown RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 TRIM11Q96F44 468 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 ANO3Q9BYT9 981 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 GOLGA6AQ9NYA3 693 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 CPSF2Q9P2I0 782 aaKnown RBP10.42□□□□□ -0.74
UBE3C-205ENST00000470408 PCDHA7Q9UN72 937 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 PRDX5P30044 214 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 NEDD9Q14511 834 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 TKFCQ3LXA3 575 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 KMT5BQ4FZB7 885 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 SLFN12LQ6IEE8 588 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 MIGA2Q7L4E1 593 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 NEDD1Q8NHV4 660 aa10.42□□□□□ -0.74
UBE3C-205ENST00000470408 POMGNT1Q8WZA1 660 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms