RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ARIH2O95376 493 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 CXCL10P02778 98 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 MYL3P08590 195 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 ACTN1P12814 892 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 TCTN1Q2MV58 587 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 VPS53Q5VIR6 699 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 SYDE2Q5VT97 1194 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 RGS22Q8NE09 1264 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 DNERQ8NFT8 737 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 OR6J1Q8NGC5 347 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 SCFD2Q8WU76 684 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 DHX38Q92620 1227 aaKnown RBP14.41□□□□□ -0.1
UBR4-211ENST00000467272 KAT2BQ92831 832 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 COPS5Q92905 334 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 HLA-CQ95604 372 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 TMEM47Q9BQJ4 181 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 CD320Q9NPF0 282 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 LMCD1Q9NZU5 365 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 RCAN3Q9UKA8 241 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 TCF20Q9UGU0 1960 aaKnown RBP14.41□□□□□ -0.1
UBR4-211ENST00000467272 TRIOO75962 3097 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 TET1Q8NFU7 2136 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 WDR19Q8NEZ3 1342 aa14.41□□□□□ -0.1
UBR4-211ENST00000467272 LCHNA4D1U4 455 aa14.4□□□□□ -0.1
UBR4-211ENST00000467272 RPS6P62753 249 aaKnown RBP14.4□□□□□ -0.1
UBR4-211ENST00000467272 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
UBR4-211ENST00000467272 TRAF7Q6Q0C0 670 aa14.4□□□□□ -0.1
UBR4-211ENST00000467272 PPP1R13LQ8WUF5 828 aa14.4□□□□□ -0.1
UBR4-211ENST00000467272 ARNTL2Q8WYA1 636 aa14.4□□□□□ -0.1
UBR4-211ENST00000467272 MAF1Q9H063 256 aa14.4□□□□□ -0.1
UBR4-211ENST00000467272 PTPRSQ13332 1948 aa14.39□□□□□ -0.11
UBR4-211ENST00000467272 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.39□□□□□ -0.11
UBR4-211ENST00000467272 PDHBP11177 359 aa14.39□□□□□ -0.11
UBR4-211ENST00000467272 TOP1P11387 765 aaKnown RBP14.39□□□□□ -0.11
UBR4-211ENST00000467272 WDR5P61964 334 aaKnown RBP14.39□□□□□ -0.11
UBR4-211ENST00000467272 BFSP2Q13515 415 aa14.39□□□□□ -0.11
UBR4-211ENST00000467272 PPP2R5BQ15173 497 aa14.39□□□□□ -0.11
UBR4-211ENST00000467272 RNF207Q6ZRF8 634 aa14.39□□□□□ -0.11
UBR4-211ENST00000467272 CAGE1Q8TC20 777 aa14.39□□□□□ -0.11
UBR4-211ENST00000467272 AFAP1L1Q8TED9 768 aa14.39□□□□□ -0.11
UBR4-211ENST00000467272 PNMA2Q9UL42 364 aa14.39□□□□□ -0.11
UBR4-211ENST00000467272 WDFY4Q6ZS81 3184 aa14.39□□□□□ -0.11
UBR4-211ENST00000467272 PTPDC1A2A3K4 754 aa14.38□□□□□ -0.11
UBR4-211ENST00000467272 PI4K2BG5E9Z4 385 aa14.38□□□□□ -0.11
UBR4-211ENST00000467272 NBNO60934 754 aa14.38□□□□□ -0.11
UBR4-211ENST00000467272 ARHGAP1Q07960 439 aa14.38□□□□□ -0.11
UBR4-211ENST00000467272 ZNF543Q08ER8 600 aa14.38□□□□□ -0.11
UBR4-211ENST00000467272 TRIM71Q2Q1W2 868 aaKnown RBP14.38□□□□□ -0.11
UBR4-211ENST00000467272 GDF6Q6KF10 455 aaPredicted RBP14.38□□□□□ -0.11
UBR4-211ENST00000467272 RETREG2Q8NC44 543 aa14.38□□□□□ -0.11
UBR4-211ENST00000467272 FSD1Q9BTV5 496 aa14.38□□□□□ -0.11
UBR4-211ENST00000467272 ISY1Q9ULR0 285 aaKnown RBP14.38□□□□□ -0.11
UBR4-211ENST00000467272 ZMYM6O95789 1325 aa14.38□□□□□ -0.11
UBR4-211ENST00000467272 RANBP6O60518 1105 aaKnown RBP14.37□□□□□ -0.11
UBR4-211ENST00000467272 FGAP02671 866 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 TXNP10599 105 aaKnown RBP14.37□□□□□ -0.11
UBR4-211ENST00000467272 CALML3P27482 149 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 ERVK-21P61565 698 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 DEFB103AP81534 67 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 PDE4DQ08499 809 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 SKIV2LQ15477 1246 aaKnown RBP14.37□□□□□ -0.11
UBR4-211ENST00000467272 CCDC96Q2M329 555 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 BRDTQ58F21 947 aaPredicted RBP14.37□□□□□ -0.11
UBR4-211ENST00000467272 TMEM31Q5JXX7 168 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
UBR4-211ENST00000467272 EMID1Q96A84 441 aaPredicted RBP14.37□□□□□ -0.11
UBR4-211ENST00000467272 TTC14Q96N46 770 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 GPHNQ9NQX3 736 aaPredicted RBP14.37□□□□□ -0.11
UBR4-211ENST00000467272 PCDHB15Q9Y5E8 787 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 FRMPD2Q68DX3 1309 aaPredicted RBP14.37□□□□□ -0.11
UBR4-211ENST00000467272 RAD50Q92878 1312 aa14.37□□□□□ -0.11
UBR4-211ENST00000467272 COL4A4P53420 1690 aaPredicted RBP14.36□□□□□ -0.11
UBR4-211ENST00000467272 KIF28PB7ZC32 967 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 GJB5O95377 273 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 MMP3P08254 477 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 HOXD8P13378 290 aaPredicted RBP14.36□□□□□ -0.11
UBR4-211ENST00000467272 SELPP16109 830 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 MBTPS1Q14703 1052 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 PTGISQ16647 500 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 FAM47CQ5HY64 1035 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 AFG1LQ8WV93 481 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 FTOQ9C0B1 505 aaKnown RBP eCLIP14.36□□□□□ -0.11
UBR4-211ENST00000467272 GPCPD1Q9NPB8 672 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 COL20A1Q9P218 1284 aa14.36□□□□□ -0.11
UBR4-211ENST00000467272 LINC01553A4QN01 128 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 HAS3O00219 553 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 PARNO95453 639 aaKnown RBP14.35□□□□□ -0.11
UBR4-211ENST00000467272 MX1P20591 662 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 COL19A1Q14993 1142 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 CNKSR3Q6P9H4 555 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 LRRC8DQ7L1W4 858 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 TBC1D5Q92609 795 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 RAD9AQ99638 391 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 HELLSQ9NRZ9 838 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 GTF2IRD1Q9UHL9 959 aa14.35□□□□□ -0.11
UBR4-211ENST00000467272 ABHD14A-ACY1A0A1B0GW23 586 aa14.34□□□□□ -0.11
UBR4-211ENST00000467272 CKBP12277 381 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms