RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 CYP2C9P11712 490 aa13.18□□□□□ -0.3
RPSA-204ENST00000458478 MRPL12P52815 198 aaKnown RBP13.18□□□□□ -0.3
RPSA-204ENST00000458478 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
RPSA-204ENST00000458478 IMMTQ16891 758 aaKnown RBP13.18□□□□□ -0.3
RPSA-204ENST00000458478 NBPF20Q3BBV1 942 aa13.18□□□□□ -0.3
RPSA-204ENST00000458478 RPUSD2Q8IZ73 545 aaKnown RBP13.18□□□□□ -0.3
RPSA-204ENST00000458478 SCFD2Q8WU76 684 aa13.18□□□□□ -0.3
RPSA-204ENST00000458478 IL25Q9H293 177 aa13.18□□□□□ -0.3
RPSA-204ENST00000458478 JMJD4Q9H9V9 463 aa13.18□□□□□ -0.3
RPSA-204ENST00000458478 VAT1LQ9HCJ6 419 aa13.18□□□□□ -0.3
RPSA-204ENST00000458478 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
RPSA-204ENST00000458478 TNKSO95271 1327 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 ABCB11O95342 1321 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 KPNA6O60684 536 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
RPSA-204ENST00000458478 TTLL4Q14679 1199 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 QRICH1Q2TAL8 776 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 BRDTQ58F21 947 aaPredicted RBP13.17□□□□□ -0.3
RPSA-204ENST00000458478 CCDC62Q6P9F0 684 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 SYTL5Q8TDW5 730 aaPredicted RBP13.17□□□□□ -0.3
RPSA-204ENST00000458478 KRT23Q9C075 422 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 MAF1Q9H063 256 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
RPSA-204ENST00000458478 PRDM12Q9H4Q4 367 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 COL20A1Q9P218 1284 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 MSRAQ9UJ68 235 aa13.17□□□□□ -0.3
RPSA-204ENST00000458478 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 PDE4AP27815 886 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 RAB30Q15771 203 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 LY6KQ17RY6 165 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 FAM47CQ5HY64 1035 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 NFRKBQ6P4R8 1299 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 SEPT14Q6ZU15 432 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 FBXO11Q86XK2 927 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 MCF2L2Q86YR7 1114 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 STAG2Q8N3U4 1231 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 USP38Q8NB14 1042 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 NSUN6Q8TEA1 469 aaKnown RBP13.16□□□□□ -0.3
RPSA-204ENST00000458478 NKX2-4Q9H2Z4 354 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
RPSA-204ENST00000458478 YBX2Q9Y2T7 364 aaKnown RBP13.16□□□□□ -0.3
RPSA-204ENST00000458478 RAD50Q92878 1312 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 DHX16O60231 1041 aaKnown RBP13.15□□□□□ -0.3
RPSA-204ENST00000458478 RABGGTBP53611 331 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 SEC23AQ15436 765 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 STXBP2Q15833 593 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 DEFB128Q7Z7B8 93 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 IWS1Q96ST2 819 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 RMDN3Q96TC7 470 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 GAS2L1Q99501 681 aaPredicted RBP13.15□□□□□ -0.3
RPSA-204ENST00000458478 UBAC1Q9BSL1 405 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 MRPL11Q9Y3B7 192 aaKnown RBP13.15□□□□□ -0.3
RPSA-204ENST00000458478 SLC4A7Q9Y6M7 1214 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 CHD9Q3L8U1 2897 aa13.15□□□□□ -0.3
RPSA-204ENST00000458478 SCN10AQ9Y5Y9 1956 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 IQCF3P0C7M6 154 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 GSPT1P15170 499 aaKnown RBP13.14□□□□□ -0.31
RPSA-204ENST00000458478 MYOGP15173 224 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 PTPN11Q06124 597 aaPredicted RBP13.14□□□□□ -0.31
RPSA-204ENST00000458478 ADGRE1Q14246 886 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 IFIT1BQ5T764 474 aaKnown RBP13.14□□□□□ -0.31
RPSA-204ENST00000458478 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 AFG1LQ8WV93 481 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 SLC28A3Q9HAS3 691 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 PRDM6Q9NQX0 595 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 MAD2L2Q9UI95 211 aa13.14□□□□□ -0.31
RPSA-204ENST00000458478 SUPT16HQ9Y5B9 1047 aaKnown RBP13.14□□□□□ -0.31
RPSA-204ENST00000458478 MYO9BQ13459 2157 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 GBF1Q92538 1859 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 PALM3A6NDB9 673 aaPredicted RBP13.13□□□□□ -0.31
RPSA-204ENST00000458478 ZBBXA8MT70 800 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 KLRF2D3W0D1 207 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 OPLAHO14841 1288 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
RPSA-204ENST00000458478 CFBP00751 764 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 GH1P01241 217 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 NR3C2P08235 984 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 PFKMP08237 780 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 EIF2AK2P19525 551 aaKnown RBP13.13□□□□□ -0.31
RPSA-204ENST00000458478 ARHGAP1Q07960 439 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 TTC22Q5TAA0 569 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 KAT2BQ92831 832 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 MTMR8Q96EF0 704 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 AMNQ9BXJ7 453 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 PXMP2Q9NR77 195 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 DDX41Q9UJV9 622 aaKnown RBP13.13□□□□□ -0.31
RPSA-204ENST00000458478 SCN5AQ14524 2016 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 MYH6P13533 1939 aa13.13□□□□□ -0.31
RPSA-204ENST00000458478 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
RPSA-204ENST00000458478 PPP1R11O60927 126 aaPredicted RBP13.12□□□□□ -0.31
RPSA-204ENST00000458478 MMP3P08254 477 aa13.12□□□□□ -0.31
RPSA-204ENST00000458478 ATP2A2P16615 1042 aaKnown RBP13.12□□□□□ -0.31
RPSA-204ENST00000458478 CASTP20810 708 aaKnown RBP13.12□□□□□ -0.31
RPSA-204ENST00000458478 IGFBP4P22692 258 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms