RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CEP128Q6ZU80 1094 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 NKIRAS1Q9NYS0 192 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 A0A1W2PQC6 194 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 TRIM49BA6NDI0 452 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 PLCB3Q01970 1234 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 FBXO11Q86XK2 927 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 SCLT1Q96NL6 688 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 PHF20Q9BVI0 1012 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 PARP2Q9UGN5 583 aa18.29■□□□□ 0.52
TCOF1-206ENST00000445265 THRAP3Q9Y2W1 955 aaKnown RBP18.29■□□□□ 0.52
TCOF1-206ENST00000445265 NR1I3Q14994 352 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 WDR44Q5JSH3 913 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 LIMA1Q9UHB6 759 aaKnown RBP18.28■□□□□ 0.52
TCOF1-206ENST00000445265 RRP15Q9Y3B9 282 aaKnown RBP18.28■□□□□ 0.52
TCOF1-206ENST00000445265 HNRNPH2P55795 449 aaKnown RBP18.28■□□□□ 0.52
TCOF1-206ENST00000445265 MAP3K9P80192 1104 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 C2orf54Q08AI8 447 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 SLFN13Q68D06 897 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 TCHPQ9BT92 498 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 CDK8P49336 464 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 ARHGAP44Q17R89 818 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 UNC13DQ70J99 1090 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 TC2NQ8N9U0 490 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 SYNCQ9H7C4 482 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 L2HGDHQ9H9P8 463 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 CCDC169A6NNP5 214 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 MOCS3O95396 460 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 KRT5P13647 590 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 TAOK1Q7L7X3 1001 aa18.28■□□□□ 0.52
TCOF1-206ENST00000445265 EPB41L4AQ9HCS5 686 aaPredicted RBP18.28■□□□□ 0.52
TCOF1-206ENST00000445265 TTC26A0AVF1 554 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 HEXIM1O94992 359 aaKnown RBP18.27■□□□□ 0.52
TCOF1-206ENST00000445265 ATP1A2P50993 1020 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 ORC2Q13416 577 aaPredicted RBP18.27■□□□□ 0.52
TCOF1-206ENST00000445265 MTF1Q14872 753 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 PTPAQ15257 358 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 CERKLQ49MI3 558 aaPredicted RBP18.27■□□□□ 0.52
TCOF1-206ENST00000445265 HINFPQ9BQA5 517 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 AMNQ9BXJ7 453 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 ADD3Q9UEY8 706 aaKnown RBP18.27■□□□□ 0.52
TCOF1-206ENST00000445265 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 COA7Q96BR5 231 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 FNBP1Q96RU3 617 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 KRT12Q99456 494 aa18.27■□□□□ 0.52
TCOF1-206ENST00000445265 NMT2O60551 498 aa18.27■□□□□ 0.51
TCOF1-206ENST00000445265 SERPING1P05155 500 aa18.27■□□□□ 0.51
TCOF1-206ENST00000445265 GRM4Q14833 912 aa18.27■□□□□ 0.51
TCOF1-206ENST00000445265 SMCR8Q8TEV9 937 aaPredicted RBP18.27■□□□□ 0.51
TCOF1-206ENST00000445265 IWS1Q96ST2 819 aa18.27■□□□□ 0.51
TCOF1-206ENST00000445265 TMEM47Q9BQJ4 181 aa18.27■□□□□ 0.51
TCOF1-206ENST00000445265 SENP2Q9HC62 589 aa18.27■□□□□ 0.51
TCOF1-206ENST00000445265 ABCB4P21439 1286 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 KCNB1Q14721 858 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 DENND2CQ68D51 928 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 ZNF34Q8IZ26 560 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 HPSEQ9Y251 543 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 ITIH6Q6UXX5 1313 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 PVALEFA0A1B0GWK0 134 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 CCDC105Q8IYK2 499 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 CHURC1Q8WUH1 139 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 CEP83Q9Y592 693 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 PXDNQ92626 1479 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 ICA1Q05084 483 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 DPYDQ12882 1025 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 ZNF365Q70YC5 407 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 FAM178BQ8IXR5 827 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 DKC1O60832 514 aaKnown RBP eCLIP18.26■□□□□ 0.51
TCOF1-206ENST00000445265 CYP2J2P51589 502 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 NKX1-1Q15270 411 aaPredicted RBP18.26■□□□□ 0.51
TCOF1-206ENST00000445265 EMBQ6PCB8 327 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 EPC1Q9H2F5 836 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 EPB41L5Q9HCM4 733 aa18.26■□□□□ 0.51
TCOF1-206ENST00000445265 BBOX1O75936 387 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 FERP16591 822 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 C10orf76Q5T2E6 689 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 ALS2CLQ60I27 953 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 ASIC3Q9UHC3 531 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 N4BP1O75113 896 aaKnown RBP18.25■□□□□ 0.51
TCOF1-206ENST00000445265 AFPP02771 609 aaKnown RBP18.25■□□□□ 0.51
TCOF1-206ENST00000445265 BIRC3Q13489 604 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 IQCGQ9H095 443 aaKnown RBP18.25■□□□□ 0.51
TCOF1-206ENST00000445265 PPANQ9NQ55 473 aaKnown RBP18.25■□□□□ 0.51
TCOF1-206ENST00000445265 RABGAP1Q9Y3P9 1069 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 CCT5P48643 541 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 GRAPQ13588 217 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 RASGRP2Q7LDG7 609 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 GRAPLQ8TC17 118 aaPredicted RBP18.25■□□□□ 0.51
TCOF1-206ENST00000445265 COL15A1P39059 1388 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 CXCR5P32302 372 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 SETDB1Q15047 1291 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 LIN9Q5TKA1 542 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 MAEAQ7L5Y9 396 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 SRBD1Q8N5C6 995 aaKnown RBP18.25■□□□□ 0.51
TCOF1-206ENST00000445265 FAM84BQ96KN1 310 aaPredicted RBP18.25■□□□□ 0.51
TCOF1-206ENST00000445265 EMILIN3Q9NT22 766 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 BARHL2Q9NY43 387 aa18.25■□□□□ 0.51
TCOF1-206ENST00000445265 FEZ2Q9UHY8 353 aaPredicted RBP18.25■□□□□ 0.51
TCOF1-206ENST00000445265 RICTORQ6R327 1708 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.511e-6■■■■□ 20.9
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms