RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 UMODL1Q5DID0 1318 aa24.53■■□□□ 1.52
VSX1-206ENST00000444511 SUPT20HL2P0C7V6 817 aa24.52■■□□□ 1.52
VSX1-206ENST00000444511 CHMLP26374 656 aa24.52■■□□□ 1.52
VSX1-206ENST00000444511 CCL23P55773 120 aa24.52■■□□□ 1.52
VSX1-206ENST00000444511 SEC23AQ15436 765 aa24.52■■□□□ 1.52
VSX1-206ENST00000444511 RASIP1Q5U651 963 aa24.52■■□□□ 1.52
VSX1-206ENST00000444511 CYB5R4Q7L1T6 521 aa24.52■■□□□ 1.52
VSX1-206ENST00000444511 COPS5Q92905 334 aa24.52■■□□□ 1.52
VSX1-206ENST00000444511 TAAR1Q96RJ0 339 aa24.52■■□□□ 1.52
VSX1-206ENST00000444511 MTIF3Q9H2K0 278 aaKnown RBP24.52■■□□□ 1.52
VSX1-206ENST00000444511 U3KPZ7 1027 aaPredicted RBP24.52■■□□□ 1.52
VSX1-206ENST00000444511 KLRF2D3W0D1 207 aa24.51■■□□□ 1.51
VSX1-206ENST00000444511 KPNA6O60684 536 aa24.51■■□□□ 1.51
VSX1-206ENST00000444511 FAM47CQ5HY64 1035 aa24.51■■□□□ 1.51
VSX1-206ENST00000444511 STAG2Q8N3U4 1231 aa24.51■■□□□ 1.51
VSX1-206ENST00000444511 MAFAQ8NHW3 353 aaPredicted RBP24.51■■□□□ 1.51
VSX1-206ENST00000444511 TIFAQ96CG3 184 aa24.51■■□□□ 1.51
VSX1-206ENST00000444511 RMDN3Q96TC7 470 aa24.51■■□□□ 1.51
VSX1-206ENST00000444511 AMNQ9BXJ7 453 aa24.51■■□□□ 1.51
VSX1-206ENST00000444511 TRMT13Q9NUP7 481 aaKnown RBP24.51■■□□□ 1.51
VSX1-206ENST00000444511 COL20A1Q9P218 1284 aa24.51■■□□□ 1.51
VSX1-206ENST00000444511 A6NJR5 290 aa24.5■■□□□ 1.51
VSX1-206ENST00000444511 FGBP02675 491 aa24.5■■□□□ 1.51
VSX1-206ENST00000444511 FOSL2P15408 326 aa24.5■■□□□ 1.51
VSX1-206ENST00000444511 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.5■■□□□ 1.51
VSX1-206ENST00000444511 HERVK_113Q902F9 699 aa24.5■■□□□ 1.51
VSX1-206ENST00000444511 IWS1Q96ST2 819 aa24.5■■□□□ 1.51
VSX1-206ENST00000444511 ARIH2O95376 493 aa24.49■■□□□ 1.51
VSX1-206ENST00000444511 CYP21A2P08686 494 aa24.49■■□□□ 1.51
VSX1-206ENST00000444511 PTH1RQ03431 593 aa24.49■■□□□ 1.51
VSX1-206ENST00000444511 STXBP2Q15833 593 aa24.49■■□□□ 1.51
VSX1-206ENST00000444511 NBPF20Q3BBV1 942 aa24.49■■□□□ 1.51
VSX1-206ENST00000444511 ARHGEF16Q5VV41 709 aa24.49■■□□□ 1.51
VSX1-206ENST00000444511 SEPT14Q6ZU15 432 aa24.49■■□□□ 1.51
VSX1-206ENST00000444511 RALYLQ86SE5 291 aaKnown RBP24.49■■□□□ 1.51
VSX1-206ENST00000444511 WNT8AQ9H1J5 351 aa24.49■■□□□ 1.51
VSX1-206ENST00000444511 ERICH2A1L162 156 aa24.48■■□□□ 1.51
VSX1-206ENST00000444511 GRXCR1A8MXD5 290 aa24.48■■□□□ 1.51
VSX1-206ENST00000444511 IFIT3O14879 490 aaKnown RBP24.48■■□□□ 1.51
VSX1-206ENST00000444511 CFBP00751 764 aa24.48■■□□□ 1.51
VSX1-206ENST00000444511 CYP2C9P11712 490 aa24.48■■□□□ 1.51
VSX1-206ENST00000444511 RPUSD2Q8IZ73 545 aaKnown RBP24.48■■□□□ 1.51
VSX1-206ENST00000444511 PBX4Q9BYU1 374 aa24.48■■□□□ 1.51
VSX1-206ENST00000444511 ZNF576Q9H609 170 aa24.48■■□□□ 1.51
VSX1-206ENST00000444511 MAD2L2Q9UI95 211 aa24.48■■□□□ 1.51
VSX1-206ENST00000444511 EIF2AK2P19525 551 aaKnown RBP24.47■■□□□ 1.51
VSX1-206ENST00000444511 PBX2P40425 430 aa24.47■■□□□ 1.51
VSX1-206ENST00000444511 GRIN2CQ14957 1233 aa24.47■■□□□ 1.51
VSX1-206ENST00000444511 CCDC62Q6P9F0 684 aa24.47■■□□□ 1.51
VSX1-206ENST00000444511 OTOP2Q7RTS6 562 aa24.47■■□□□ 1.51
VSX1-206ENST00000444511 SCLYQ96I15 445 aa24.47■■□□□ 1.51
VSX1-206ENST00000444511 PALM3A6NDB9 673 aaPredicted RBP24.46■■□□□ 1.51
VSX1-206ENST00000444511 ZBTB5O15062 677 aa24.46■■□□□ 1.51
VSX1-206ENST00000444511 GH1P01241 217 aa24.46■■□□□ 1.51
VSX1-206ENST00000444511 CHMP4BP1P59074 171 aa24.46■■□□□ 1.51
VSX1-206ENST00000444511 SART3Q15020 963 aaKnown RBP24.46■■□□□ 1.51
VSX1-206ENST00000444511 LY6KQ17RY6 165 aa24.46■■□□□ 1.51
VSX1-206ENST00000444511 NFRKBQ6P4R8 1299 aa24.46■■□□□ 1.51
VSX1-206ENST00000444511 NCOA7Q8NI08 942 aa24.46■■□□□ 1.51
VSX1-206ENST00000444511 CXXC1Q9P0U4 656 aaPredicted RBP24.46■■□□□ 1.51
VSX1-206ENST00000444511 E7EWF7 191 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 SGSM2O43147 1006 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 WTAPQ15007 396 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 RAB30Q15771 203 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 CHST3Q7LGC8 479 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 HOMER1Q86YM7 354 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 PPP1R13LQ8WUF5 828 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 AFG1LQ8WV93 481 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 MTMR8Q96EF0 704 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 PXMP2Q9NR77 195 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 MSRAQ9UJ68 235 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 PCDHA1Q9Y5I3 950 aa24.45■■□□□ 1.5
VSX1-206ENST00000444511 OPLAHO14841 1288 aa24.44■■□□□ 1.5
VSX1-206ENST00000444511 PPP1R11O60927 126 aaPredicted RBP24.44■■□□□ 1.5
VSX1-206ENST00000444511 EIF3JO75822 258 aaKnown RBP24.44■■□□□ 1.5
VSX1-206ENST00000444511 NR3C2P08235 984 aa24.44■■□□□ 1.5
VSX1-206ENST00000444511 HSD17B4P51659 736 aa24.44■■□□□ 1.5
VSX1-206ENST00000444511 PTPN11Q06124 597 aaPredicted RBP24.44■■□□□ 1.5
VSX1-206ENST00000444511 TRAF1Q13077 416 aa24.44■■□□□ 1.5
VSX1-206ENST00000444511 GRM4Q14833 912 aa24.44■■□□□ 1.5
VSX1-206ENST00000444511 NOD1Q9Y239 953 aa24.44■■□□□ 1.5
VSX1-206ENST00000444511 MMP3P08254 477 aa24.43■■□□□ 1.5
VSX1-206ENST00000444511 ARHGAP1Q07960 439 aa24.43■■□□□ 1.5
VSX1-206ENST00000444511 MAP3K20Q9NYL2 800 aaKnown RBP24.43■■□□□ 1.5
VSX1-206ENST00000444511 MRVI1Q9Y6F6 885 aa24.43■■□□□ 1.5
VSX1-206ENST00000444511 TAF6LQ9Y6J9 622 aa24.43■■□□□ 1.5
VSX1-206ENST00000444511 ZBBXA8MT70 800 aa24.42■■□□□ 1.5
VSX1-206ENST00000444511 PFKMP08237 780 aa24.42■■□□□ 1.5
VSX1-206ENST00000444511 GHRHRQ02643 423 aa24.42■■□□□ 1.5
VSX1-206ENST00000444511 TMEM67Q5HYA8 995 aa24.42■■□□□ 1.5
VSX1-206ENST00000444511 RETREG2Q8NC44 543 aa24.42■■□□□ 1.5
VSX1-206ENST00000444511 PIGSQ96S52 555 aa24.42■■□□□ 1.5
VSX1-206ENST00000444511 SENP2Q9HC62 589 aa24.42■■□□□ 1.5
VSX1-206ENST00000444511 SLC4A7Q9Y6M7 1214 aa24.42■■□□□ 1.5
VSX1-206ENST00000444511 MYCLP12524 364 aaPredicted RBP24.41■■□□□ 1.5
VSX1-206ENST00000444511 CASTP20810 708 aaKnown RBP24.41■■□□□ 1.5
VSX1-206ENST00000444511 STOX1Q6ZVD7 989 aa24.41■■□□□ 1.5
VSX1-206ENST00000444511 DEFB128Q7Z7B8 93 aa24.41■■□□□ 1.5
VSX1-206ENST00000444511 CATIPQ7Z7H3 387 aa24.41■■□□□ 1.5
VSX1-206ENST00000444511 SAMD3Q8N6K7 520 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms