RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 PPP1R14AQ96A00 147 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TRIM39Q9HCM9 518 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NDOR1Q9UHB4 597 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CEP83Q9Y592 693 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MYO5CQ9NQX4 1742 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PLEKHH2Q8IVE3 1493 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TMEM110-MUSTN1A8MSY1 372 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZEB2O60315 1214 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MAP3K6O95382 1288 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ASLP04424 464 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RHOQP17081 205 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TNFAIP3P21580 790 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CCND1P24385 295 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CDK8P49336 464 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PTPN14Q15678 1187 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZNF423Q2M1K9 1284 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 BBS9Q3SYG4 887 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TRIM61Q5EBN2 209 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CDCP2Q5VXM1 449 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NSMFQ6X4W1 530 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PI4K2BQ8TCG2 481 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PANK2Q9BZ23 570 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MTFR1LQ9H019 292 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TSPYL1Q9H0U9 437 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 EFCC1Q9HA90 598 aa6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CHCHD3Q9NX63 227 aaKnown RBP6.73□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 TTC37Q6PGP7 1564 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RASSF10A6NK89 507 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NEMP1O14524 444 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 BAIAP3O94812 1187 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RHOBTB3O94955 611 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 JMJD7P0C870 316 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PLCG1P19174 1290 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 HTR3AP46098 478 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZNF460Q14592 562 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 BRAPQ7Z569 592 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MNS1Q8NEH6 495 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 DDX54Q8TDD1 881 aaKnown RBP6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SMCR8Q8TEV9 937 aaPredicted RBP6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RABL2AQ9UBK7 228 aaPredicted RBP6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 RCAN3Q9UKA8 241 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PCDHA4Q9UN74 947 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SNX5Q9Y5X3 404 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SYCP2Q9BX26 1530 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ARHGEF12Q9NZN5 1544 aa6.72□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 KIF7Q2M1P5 1343 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ANKRD34BA5PLL1 514 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 GFRA2O00451 464 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CPLX1O14810 134 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PRODHO43272 600 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PIP5K1CO60331 668 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SNUPNO95149 360 aaKnown RBP6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 FGFR1P11362 822 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PABPC1P11940 636 aaKnown RBP6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 GYS1P13807 737 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 NRLP54845 237 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ATP11AP98196 1134 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CFAP100Q494V2 611 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 COBLL1Q53SF7 1204 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 EFHC2Q5JST6 749 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 WIPI1Q5MNZ9 446 aaPredicted RBP6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ZNF713Q8N859 430 aaPredicted RBP6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 LRRN4CLQ8ND94 238 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 SLC7A14Q8TBB6 771 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 CDK5RAP3Q96JB5 506 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 POP1Q99575 1024 aaKnown RBP6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 AP1M1Q9BXS5 423 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ABCG4Q9H172 646 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 PGAP2Q9UHJ9 254 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 ERCC6L2Q5T890 1561 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 MAST1Q9Y2H9 1570 aa6.71□□□□□ -1.33
ALMS1-IT1-201ENST00000441587 UHRF1BP1Q6BDS2 1440 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 USP47Q96K76 1375 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 UQCRHLA0A096LP55 91 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 LOC102724428A0A0B4J2F2 783 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 EFCAB14O75071 495 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 UQCRHP07919 91 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SCNN1BP51168 640 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SIK1P57059 783 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 BIRC3Q13489 604 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PPP2R5BQ15173 497 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SAFBQ15424 915 aaKnown RBP eCLIP6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 LINC00528Q8N1L1 170 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 OR2W6PQ8NHA6 318 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SNIP1Q8TAD8 396 aaKnown RBP6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ATP6V1E2Q96A05 226 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TRMT2BQ96GJ1 504 aaKnown RBP6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ACSBG1Q96GR2 724 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ELAC2Q9BQ52 826 aaKnown RBP6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 HERPUD2Q9BSE4 406 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PRKRIP1Q9H875 184 aaPredicted RBP6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SEL1LQ9UBV2 794 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 KLHL3Q9UH77 587 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TBK1Q9UHD2 729 aa6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 APOBEC2Q9Y235 224 aaKnown RBP6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 RRP15Q9Y3B9 282 aaKnown RBP6.71□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 VIRMAQ69YN4 1812 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms