RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 FRMPD4Q14CM0 1322 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 RPTORQ8N122 1335 aa24.02■■□□□ 1.44
VPS13B-204ENST00000441350 CRHR2Q13324 411 aa24.01■■□□□ 1.43
VPS13B-204ENST00000441350 SLC39A14Q15043 492 aa24.01■■□□□ 1.43
VPS13B-204ENST00000441350 ZNF174Q15697 407 aa24.01■■□□□ 1.43
VPS13B-204ENST00000441350 SPATA32Q96LK8 384 aa24.01■■□□□ 1.43
VPS13B-204ENST00000441350 TAAR1Q96RJ0 339 aa24.01■■□□□ 1.43
VPS13B-204ENST00000441350 EHMT1Q9H9B1 1298 aa24.01■■□□□ 1.43
VPS13B-204ENST00000441350 EFCC1Q9HA90 598 aa24.01■■□□□ 1.43
VPS13B-204ENST00000441350 ELP1O95163 1332 aa24■■□□□ 1.43
VPS13B-204ENST00000441350 CYP3A4P08684 503 aa24■■□□□ 1.43
VPS13B-204ENST00000441350 LETM2Q2VYF4 491 aa24■■□□□ 1.43
VPS13B-204ENST00000441350 ANKRD35Q8N283 1001 aa24■■□□□ 1.43
VPS13B-204ENST00000441350 LCTP09848 1927 aa24■■□□□ 1.43
VPS13B-204ENST00000441350 ORC2Q13416 577 aaPredicted RBP23.99■■□□□ 1.43
VPS13B-204ENST00000441350 STK38Q15208 465 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 PURBQ96QR8 312 aaKnown RBP23.99■■□□□ 1.43
VPS13B-204ENST00000441350 CEP131Q9UPN4 1083 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 MORC2Q9Y6X9 1032 aaPredicted RBP23.99■■□□□ 1.43
VPS13B-204ENST00000441350 THSD7BQ9C0I4 1608 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 CYP3A7-CYP3A51PA0A087WV96 503 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 BMP15O95972 392 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 CYP3A7P24462 503 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 MCM7P33993 719 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 CSPP1Q1MSJ5 1256 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 PPP4R3AQ6IN85 833 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 RMDN3Q96TC7 470 aa23.99■■□□□ 1.43
VPS13B-204ENST00000441350 GOLGA6L22H0YM25 854 aa23.98■■□□□ 1.43
VPS13B-204ENST00000441350 CCNT1O60563 726 aaKnown RBP23.98■■□□□ 1.43
VPS13B-204ENST00000441350 CIITAP33076 1130 aa23.98■■□□□ 1.43
VPS13B-204ENST00000441350 NFKBIBQ15653 356 aa23.98■■□□□ 1.43
VPS13B-204ENST00000441350 MOXD1Q6UVY6 613 aa23.98■■□□□ 1.43
VPS13B-204ENST00000441350 C4orf32Q8N8J7 132 aa23.98■■□□□ 1.43
VPS13B-204ENST00000441350 KCNG4Q8TDN1 519 aa23.98■■□□□ 1.43
VPS13B-204ENST00000441350 MBOAT7Q96N66 472 aa23.98■■□□□ 1.43
VPS13B-204ENST00000441350 MMP19Q99542 508 aa23.98■■□□□ 1.43
VPS13B-204ENST00000441350 NAP1L4Q99733 375 aaKnown RBP23.98■■□□□ 1.43
VPS13B-204ENST00000441350 PXMP2Q9NR77 195 aa23.98■■□□□ 1.43
VPS13B-204ENST00000441350 DNAJC25-GNG10A0A024R161 153 aa23.97■■□□□ 1.43
VPS13B-204ENST00000441350 SPTLC2O15270 562 aa23.97■■□□□ 1.43
VPS13B-204ENST00000441350 TDP2O95551 362 aa23.97■■□□□ 1.43
VPS13B-204ENST00000441350 FCER1AP12319 257 aa23.97■■□□□ 1.43
VPS13B-204ENST00000441350 GCFC2P16383 781 aaKnown RBP23.97■■□□□ 1.43
VPS13B-204ENST00000441350 KCTD2Q14681 263 aa23.97■■□□□ 1.43
VPS13B-204ENST00000441350 FAM133AQ8N9E0 248 aa23.97■■□□□ 1.43
VPS13B-204ENST00000441350 ZNFX1Q9P2E3 1918 aaKnown RBP23.97■■□□□ 1.43
VPS13B-204ENST00000441350 PPP6R2O75170 966 aa23.96■■□□□ 1.43
VPS13B-204ENST00000441350 PRPF40AO75400 957 aaKnown RBP23.96■■□□□ 1.43
VPS13B-204ENST00000441350 MAPK4P31152 587 aa23.96■■□□□ 1.43
VPS13B-204ENST00000441350 ATP2C1P98194 919 aaPredicted RBP23.96■■□□□ 1.43
VPS13B-204ENST00000441350 PTGDRQ13258 359 aa23.96■■□□□ 1.43
VPS13B-204ENST00000441350 WDR78Q5VTH9 848 aa23.96■■□□□ 1.43
VPS13B-204ENST00000441350 ABRAQ8N0Z2 381 aa23.96■■□□□ 1.43
VPS13B-204ENST00000441350 LMBRD1Q9NUN5 540 aa23.96■■□□□ 1.43
VPS13B-204ENST00000441350 PLXNB2O15031 1838 aa23.95■■□□□ 1.43
VPS13B-204ENST00000441350 STRNO43815 780 aa23.95■■□□□ 1.43
VPS13B-204ENST00000441350 UBXN2AP68543 259 aa23.95■■□□□ 1.43
VPS13B-204ENST00000441350 CNTN2Q02246 1040 aa23.95■■□□□ 1.43
VPS13B-204ENST00000441350 CCAR1Q8IX12 1150 aaKnown RBP23.95■■□□□ 1.43
VPS13B-204ENST00000441350 DNERQ8NFT8 737 aa23.95■■□□□ 1.43
VPS13B-204ENST00000441350 IL31RAQ8NI17 732 aa23.95■■□□□ 1.43
VPS13B-204ENST00000441350 NSUN6Q8TEA1 469 aaKnown RBP23.95■■□□□ 1.43
VPS13B-204ENST00000441350 PDCD2LQ9BRP1 358 aa23.95■■□□□ 1.43
VPS13B-204ENST00000441350 DDX11L8A8MPP1 907 aa23.95■■□□□ 1.42
VPS13B-204ENST00000441350 POTEB2H3BUK9 544 aa23.95■■□□□ 1.42
VPS13B-204ENST00000441350 PGM5Q15124 567 aa23.95■■□□□ 1.42
VPS13B-204ENST00000441350 ARHGEF16Q5VV41 709 aa23.95■■□□□ 1.42
VPS13B-204ENST00000441350 PCNX4Q63HM2 1172 aa23.95■■□□□ 1.42
VPS13B-204ENST00000441350 CFHR5Q9BXR6 569 aa23.95■■□□□ 1.42
VPS13B-204ENST00000441350 TMEM60Q9H2L4 133 aa23.95■■□□□ 1.42
VPS13B-204ENST00000441350 MRVI1Q9Y6F6 885 aa23.95■■□□□ 1.42
VPS13B-204ENST00000441350 ASTN1O14525 1302 aa23.94■■□□□ 1.42
VPS13B-204ENST00000441350 FAM86B1E9PN63 330 aa23.94■■□□□ 1.42
VPS13B-204ENST00000441350 SLC37A4O43826 429 aa23.94■■□□□ 1.42
VPS13B-204ENST00000441350 NEMFO60524 1076 aa23.94■■□□□ 1.42
VPS13B-204ENST00000441350 FAM86B2P0C5J1 330 aa23.94■■□□□ 1.42
VPS13B-204ENST00000441350 HSPA6P17066 643 aa23.94■■□□□ 1.42
VPS13B-204ENST00000441350 EIF2AK2P19525 551 aaKnown RBP23.94■■□□□ 1.42
VPS13B-204ENST00000441350 MARCKSP29966 332 aaPredicted RBP23.94■■□□□ 1.42
VPS13B-204ENST00000441350 GPR142Q7Z601 462 aa23.94■■□□□ 1.42
VPS13B-204ENST00000441350 DDX25Q9UHL0 483 aaKnown RBP23.94■■□□□ 1.42
VPS13B-204ENST00000441350 SOWAHBA6NEL2 793 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 LAD1O00515 517 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 PTPREP23469 700 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 C1QTNF8P60827 252 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 Q4G0T1 1027 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 XRRA1Q6P2D8 792 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 PLEKHH3Q7Z736 793 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 JMYQ8N9B5 988 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 LENG9Q96B70 501 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 PCDHA7Q9UN72 937 aa23.93■■□□□ 1.42
VPS13B-204ENST00000441350 IGLV3-22A0A075B6J6 115 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 PGK2P07205 417 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 ME1P48163 572 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 MRPS9P82933 396 aaKnown RBP23.92■■□□□ 1.42
VPS13B-204ENST00000441350 ARL6IP4Q66PJ3 421 aaKnown RBP23.92■■□□□ 1.42
VPS13B-204ENST00000441350 VSIG10LQ86VR7 867 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 POTEDQ86YR6 584 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 FGD4Q96M96 766 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 MTMR9Q96QG7 549 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms