RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ACBD5Q5T8D3 534 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 YOD1Q5VVQ6 348 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 E4F1Q66K89 784 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 IQCEQ6IPM2 695 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 NSMFQ6X4W1 530 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 LILRB2Q8N423 598 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 FBXO15Q8NCQ5 510 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 ZSWIM2Q8NEG5 633 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 FAM84AQ96KN4 292 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 MCOLN1Q9GZU1 580 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 GULP1Q9UBP9 304 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 A0A1W2PQ27 194 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 A0A1W2PQ64 194 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 A0A1W2PQC6 194 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 A0A1W2PQD8 194 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 MEFVO15553 781 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 PEX10O60683 326 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 ARL4AP40617 200 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 BUD31P41223 144 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 SUMO1P63165 101 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 KCNAB2Q13303 367 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 CBX2Q14781 532 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 SCUBE1Q8IWY4 988 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 OSBP2Q969R2 916 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 RWDD3Q9Y3V2 267 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 TRBV23-1A0A0A0MS06 115 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 CCDC163A0A0D9SF12 145 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 MPOP05164 745 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 DBHP09172 617 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 GLI4P10075 376 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 VIPR1P32241 457 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 FOXB2Q5VYV0 432 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 RPTNQ6XPR3 784 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 SYDE1Q6ZW31 735 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 PPIL6Q8IXY8 311 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 RCBTB1Q8NDN9 531 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 PLEKHO2Q8TD55 490 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 SH3TC2Q8TF17 1288 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 NPFFR2Q9Y5X5 522 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 PTCH2Q9Y6C5 1203 aa5.47□□□□□ -1.53
TRAPPC13-204ENST00000438419 LOC105371045A0A1W2PR82 267 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 NUDT19A8MXV4 375 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 HRKO00198 91 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 SRGAP3O43295 1099 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 NPHS1O60500 1241 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 LCP1P13796 627 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 RAB3GAP1Q15042 981 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 NTRK3Q16288 839 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 BICRALQ6AI39 1079 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 LZTR1Q8N653 840 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 DIO2Q92813 273 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 RNPC3Q96LT9 517 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 DHRS4Q9BTZ2 278 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 SGPP1Q9BX95 441 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 GCM1Q9NP62 436 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 FBXL7Q9UJT9 491 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 TMA7Q9Y2S6 64 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 HCFC2Q9Y5Z7 792 aa5.46□□□□□ -1.54
TRAPPC13-204ENST00000438419 TEX51A0A1B0GUA7 166 aa5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 ETV2O00321 342 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 LTBRP36941 435 aa5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 SRSF3P84103 164 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 FAM209AQ5JX71 171 aa5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 PAQR3Q6TCH7 311 aa5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 JAZF1Q86VZ6 243 aa5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 EXOC2Q96KP1 924 aa5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 TMEM260Q9NX78 707 aa5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 MBD1Q9UIS9 605 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 MRPS23Q9Y3D9 190 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-204ENST00000438419 ZC3H12DA2A288 527 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 BLACEA4D250 179 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 MYO1BO43795 1136 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 MSCO60682 206 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 FUCA1P04066 466 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 CYBBP04839 570 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 C1QTNF9P0C862 333 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 MED14OSP0DP75 135 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 BCL6P41182 706 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 SQSTM1Q13501 440 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 NR1I3Q14994 352 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 PLEKHN1Q494U1 663 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 RSPO2Q6UXX9 243 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 USP53Q70EK8 1073 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 NLRP10Q86W26 655 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 HOMER1Q86YM7 354 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 CILP2Q8IUL8 1156 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 TEX2Q8IWB9 1127 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 BHLHE22Q8NFJ8 381 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 DCAF4Q8WV16 495 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 KCNN1Q92952 543 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 KISS1RQ969F8 398 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 ZFYVE21Q9BQ24 234 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 CNTD2Q9H8S5 307 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 RXFP1Q9HBX9 757 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 MARCH2Q9P0N8 246 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 PLA2G2DQ9UNK4 145 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 TBX22Q9Y458 520 aa5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 TIMM13Q9Y5L4 95 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms