RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 TMOD4Q9NZQ9 345 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 N6AMT1Q9Y5N5 214 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 UBR2Q8IWV8 1755 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 MRC1P22897 1456 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 RASSF10A6NK89 507 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 KLF4O43474 513 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 KCNQ3O43525 872 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 TMCC2O75069 709 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 CAMTA2O94983 1202 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 INMTO95050 263 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 CNOT4O95628 575 aaKnown RBP6.3□□□□□ -1.4
RFC3-202ENST00000434425 CAPN2P17655 700 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 VCAM1P19320 739 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 CCNCP24863 283 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 IL6STP40189 918 aaPredicted RBP6.3□□□□□ -1.4
RFC3-202ENST00000434425 PIP4K2AP48426 406 aaPredicted RBP6.3□□□□□ -1.4
RFC3-202ENST00000434425 NEK3P51956 506 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 GABREP78334 506 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 PTPN12Q05209 780 aaKnown RBP6.3□□□□□ -1.4
RFC3-202ENST00000434425 TAF7Q15545 349 aaPredicted RBP6.3□□□□□ -1.4
RFC3-202ENST00000434425 DEFB115Q30KQ5 88 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 C4orf48Q5BLP8 95 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 MAP1SQ66K74 1059 aaPredicted RBP6.3□□□□□ -1.4
RFC3-202ENST00000434425 IL31Q6EBC2 164 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 ZNF790Q6PG37 636 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 ABRAXAS1Q6UWZ7 409 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 TMC7Q7Z402 723 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 PLEKHM2Q8IWE5 1019 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 CCDC144CPQ8IYA2 1237 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 CNBD1Q8NA66 436 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 BAP1Q92560 729 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 SNX21Q969T3 373 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 NACC2Q96BF6 587 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 SCLT1Q96NL6 688 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 NLRP3Q96P20 1036 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 MOGAT1Q96PD6 335 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 PURBQ96QR8 312 aaKnown RBP6.3□□□□□ -1.4
RFC3-202ENST00000434425 CRBNQ96SW2 442 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 ARHGAP9Q9BRR9 750 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 PRKD2Q9BZL6 878 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 ZNF277Q9NRM2 450 aaPredicted RBP6.3□□□□□ -1.4
RFC3-202ENST00000434425 PPP1R9AQ9ULJ8 1098 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 GPSM3Q9Y4H4 160 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 TTLL3Q9Y4R7 772 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 SNCAIPQ9Y6H5 919 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 DGKBQ9Y6T7 804 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 WDR33Q9C0J8 1336 aaKnown RBP6.3□□□□□ -1.4
RFC3-202ENST00000434425 ZNF541Q9H0D2 1346 aa6.3□□□□□ -1.4
RFC3-202ENST00000434425 CCDC196A0A1B0GTZ2 297 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 PRAMEF22A3QJZ6 481 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 LDHBP07195 334 aaKnown RBP6.29□□□□□ -1.4
RFC3-202ENST00000434425 HSPA8P11142 646 aaKnown RBP6.29□□□□□ -1.4
RFC3-202ENST00000434425 EPHX2P34913 555 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 PLA2G4AP47712 749 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 HSD17B7P56937 341 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 SQSTM1Q13501 440 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 LINC01559Q495D7 138 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 FAM102BQ5T8I3 360 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 CENPQQ7L2Z9 268 aaPredicted RBP6.29□□□□□ -1.4
RFC3-202ENST00000434425 PLPP7Q8NBV4 271 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 ARMC2Q8NEN0 867 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 OR8H1Q8NGG4 311 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 FAM200AQ8TCP9 573 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 GPKOWQ92917 476 aaPredicted RBP eCLIP6.29□□□□□ -1.4
RFC3-202ENST00000434425 FOXJ1Q92949 421 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 ABHD8Q96I13 439 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 RMDN2Q96LZ7 410 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 TBATAQ96M53 351 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 ASPSCR1Q9BZE9 553 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 SLC6A16Q9GZN6 736 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 ZNF408Q9H9D4 720 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 CYLDQ9NQC7 956 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 PIH1D1Q9NWS0 290 aaKnown RBP6.29□□□□□ -1.4
RFC3-202ENST00000434425 IRAK4Q9NWZ3 460 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 QPCTLQ9NXS2 382 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 STIM2Q9P246 746 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 CLIP2Q9UDT6 1046 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 HACL1Q9UJ83 578 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 FAM184BQ9ULE4 1060 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 USP16Q9Y5T5 823 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 HEG1Q9ULI3 1381 aa6.29□□□□□ -1.4
RFC3-202ENST00000434425 A0A0B4J203 849 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 GNAT3A8MTJ3 354 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 FZD9O00144 591 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 NBNO60934 754 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 CLASP2O75122 1294 aaKnown RBP6.28□□□□□ -1.4
RFC3-202ENST00000434425 S1PR4O95977 384 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 RPS2P15880 293 aaKnown RBP6.28□□□□□ -1.4
RFC3-202ENST00000434425 RENBPP51606 427 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 NEK2P51955 445 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 ST5P78524 1137 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 SLC7A5Q01650 507 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 FKBP4Q02790 459 aaKnown RBP eCLIP6.28□□□□□ -1.4
RFC3-202ENST00000434425 MECOMQ03112 1051 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 TEFQ10587 303 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 TBX2Q13207 712 aaPredicted RBP6.28□□□□□ -1.4
RFC3-202ENST00000434425 RAB33AQ14088 237 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 MLC1Q15049 377 aa6.28□□□□□ -1.4
RFC3-202ENST00000434425 PKN1Q16512 942 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms