RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 PAMP19021 973 aa7.81□□□□□ -1.16
RAB3GAP1-202ENST00000425393 VHLLQ6RSH7 139 aa7.81□□□□□ -1.16
RAB3GAP1-202ENST00000425393 ZNF526Q8TF50 670 aaPredicted RBP7.81□□□□□ -1.16
RAB3GAP1-202ENST00000425393 PEX11GQ96HA9 241 aa7.81□□□□□ -1.16
RAB3GAP1-202ENST00000425393 SPATA25Q9BR10 227 aa7.81□□□□□ -1.16
RAB3GAP1-202ENST00000425393 NUDT5Q9UKK9 219 aa7.81□□□□□ -1.16
RAB3GAP1-202ENST00000425393 TRBV23OR9-2A0A075B6M9 112 aa7.8□□□□□ -1.16
RAB3GAP1-202ENST00000425393 NPHP3-ACAD11A0A0J9YXS1 232 aa7.8□□□□□ -1.16
RAB3GAP1-202ENST00000425393 ADRB1P08588 477 aa7.8□□□□□ -1.16
RAB3GAP1-202ENST00000425393 CASP7P55210 303 aa7.8□□□□□ -1.16
RAB3GAP1-202ENST00000425393 NFKB2Q00653 900 aa7.8□□□□□ -1.16
RAB3GAP1-202ENST00000425393 WWC2Q6AWC2 1192 aa7.8□□□□□ -1.16
RAB3GAP1-202ENST00000425393 KIAA1211LQ6NV74 962 aa7.8□□□□□ -1.16
RAB3GAP1-202ENST00000425393 FAM169BQ8N8A8 192 aa7.8□□□□□ -1.16
RAB3GAP1-202ENST00000425393 C7orf72A4D263 438 aa7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 ANKRD34BA5PLL1 514 aa7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 PRICKLE3O43900 615 aaPredicted RBP7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 ARID5AQ03989 594 aa7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 SLC9A5Q14940 896 aa7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 MCF2L2Q86YR7 1114 aa7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 SMARCC2Q8TAQ2 1214 aa7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 CPA5Q8WXQ8 436 aa7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 BDH2Q9BUT1 245 aa7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 AKT3Q9Y243 479 aa7.79□□□□□ -1.16
RAB3GAP1-202ENST00000425393 RTP5Q14D33 572 aa7.78□□□□□ -1.16
RAB3GAP1-202ENST00000425393 NT5DC1Q5TFE4 455 aa7.78□□□□□ -1.16
RAB3GAP1-202ENST00000425393 CPLX3Q8WVH0 158 aa7.78□□□□□ -1.16
RAB3GAP1-202ENST00000425393 COPS5Q92905 334 aa7.78□□□□□ -1.16
RAB3GAP1-202ENST00000425393 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.78□□□□□ -1.16
RAB3GAP1-202ENST00000425393 CLEC1BQ9P126 229 aa7.78□□□□□ -1.16
RAB3GAP1-202ENST00000425393 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
RAB3GAP1-202ENST00000425393 EMC9Q9Y3B6 208 aa7.78□□□□□ -1.16
RAB3GAP1-202ENST00000425393 NPHS1O60500 1241 aa7.77□□□□□ -1.17
RAB3GAP1-202ENST00000425393 ZBTB7AO95365 584 aa7.77□□□□□ -1.17
RAB3GAP1-202ENST00000425393 SCRN1Q12765 414 aa7.77□□□□□ -1.17
RAB3GAP1-202ENST00000425393 MBLAC2Q68D91 279 aa7.77□□□□□ -1.17
RAB3GAP1-202ENST00000425393 VPS37DQ86XT2 251 aa7.77□□□□□ -1.17
RAB3GAP1-202ENST00000425393 USP33Q8TEY7 942 aa7.77□□□□□ -1.17
RAB3GAP1-202ENST00000425393 SREK1Q8WXA9 508 aaKnown RBP7.77□□□□□ -1.17
RAB3GAP1-202ENST00000425393 NOX5Q96PH1 765 aa7.77□□□□□ -1.17
RAB3GAP1-202ENST00000425393 USP40Q9NVE5 1235 aa7.77□□□□□ -1.17
RAB3GAP1-202ENST00000425393 KCNH1O95259 989 aa7.76□□□□□ -1.17
RAB3GAP1-202ENST00000425393 NTRK1P04629 796 aa7.76□□□□□ -1.17
RAB3GAP1-202ENST00000425393 PLS3P13797 630 aa7.76□□□□□ -1.17
RAB3GAP1-202ENST00000425393 CACNB2Q08289 660 aaPredicted RBP7.76□□□□□ -1.17
RAB3GAP1-202ENST00000425393 EFEMP1Q12805 493 aa7.76□□□□□ -1.17
RAB3GAP1-202ENST00000425393 ZFYVE27Q5T4F4 411 aa7.76□□□□□ -1.17
RAB3GAP1-202ENST00000425393 CARFQ8N187 725 aa7.76□□□□□ -1.17
RAB3GAP1-202ENST00000425393 SIT1Q9Y3P8 196 aa7.76□□□□□ -1.17
RAB3GAP1-202ENST00000425393 FUCA1P04066 466 aa7.75□□□□□ -1.17
RAB3GAP1-202ENST00000425393 PLP2Q04941 152 aa7.75□□□□□ -1.17
RAB3GAP1-202ENST00000425393 SPATS1Q496A3 300 aa7.75□□□□□ -1.17
RAB3GAP1-202ENST00000425393 CRACR2BQ8N4Y2 399 aaPredicted RBP7.75□□□□□ -1.17
RAB3GAP1-202ENST00000425393 BVESQ8NE79 360 aa7.75□□□□□ -1.17
RAB3GAP1-202ENST00000425393 PLEKHO2Q8TD55 490 aa7.75□□□□□ -1.17
RAB3GAP1-202ENST00000425393 MMP19Q99542 508 aa7.75□□□□□ -1.17
RAB3GAP1-202ENST00000425393 GPRC5CQ9NQ84 441 aa7.75□□□□□ -1.17
RAB3GAP1-202ENST00000425393 DNAJA1P31689 397 aaKnown RBP7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 ZNF143P52747 638 aaPredicted RBP7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 RBM10P98175 930 aaKnown RBP7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 SF3A1Q15459 793 aaKnown RBP7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 POMZP3Q6PJE2 187 aa7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 DCP2Q8IU60 420 aaKnown RBP7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 ARMC5Q96C12 935 aa7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 KRTAP17-1Q9BYP8 105 aa7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 SPATA6Q9NWH7 488 aaPredicted RBP7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 MARCH2Q9P0N8 246 aa7.74□□□□□ -1.17
RAB3GAP1-202ENST00000425393 THBDP07204 575 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 C8BP07358 591 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 UBXN11Q5T124 520 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 GTF2IRD2BQ6EKJ0 949 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 GTF2IRD2Q86UP8 949 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 FERMT3Q86UX7 667 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 TRIM59Q8IWR1 403 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 DPF3Q92784 378 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 ZBTB8AQ96BR9 441 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 ANAPC16Q96DE5 110 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 DDX11Q96FC9 970 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 APBA2Q99767 749 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.73□□□□□ -1.172e-6■■■□□ 17.6
RAB3GAP1-202ENST00000425393 NTMQ9P121 344 aa7.73□□□□□ -1.17
RAB3GAP1-202ENST00000425393 NOBOXO60393 691 aa7.72□□□□□ -1.17
RAB3GAP1-202ENST00000425393 NAT2P11245 290 aa7.72□□□□□ -1.17
RAB3GAP1-202ENST00000425393 CYP4F3Q08477 520 aa7.72□□□□□ -1.17
RAB3GAP1-202ENST00000425393 NCAPHQ15003 741 aa7.72□□□□□ -1.17
RAB3GAP1-202ENST00000425393 INF2Q27J81 1249 aa7.72□□□□□ -1.17
RAB3GAP1-202ENST00000425393 MRGPRX3Q96LB0 322 aa7.72□□□□□ -1.17
RAB3GAP1-202ENST00000425393 LGR4Q9BXB1 951 aa7.72□□□□□ -1.17
RAB3GAP1-202ENST00000425393 TANGO6Q9C0B7 1094 aa7.72□□□□□ -1.17
RAB3GAP1-202ENST00000425393 DUSP10Q9Y6W6 482 aa7.72□□□□□ -1.17
RAB3GAP1-202ENST00000425393 NOP56O00567 594 aaKnown RBP7.71□□□□□ -1.18
RAB3GAP1-202ENST00000425393 CYP2C8P10632 490 aa7.71□□□□□ -1.18
RAB3GAP1-202ENST00000425393 GJA9P57773 515 aa7.71□□□□□ -1.18
RAB3GAP1-202ENST00000425393 SMAD4Q13485 552 aaKnown RBP7.71□□□□□ -1.18
RAB3GAP1-202ENST00000425393 GGNQ86UU5 652 aa7.71□□□□□ -1.18
RAB3GAP1-202ENST00000425393 ZNF761Q86XN6 746 aaPredicted RBP7.71□□□□□ -1.18
RAB3GAP1-202ENST00000425393 TEX2Q8IWB9 1127 aa7.71□□□□□ -1.18
RAB3GAP1-202ENST00000425393 LINC00482Q8N8I6 264 aa7.71□□□□□ -1.18
RAB3GAP1-202ENST00000425393 NPLOC4Q8TAT6 608 aa7.71□□□□□ -1.18
RAB3GAP1-202ENST00000425393 GORASP1Q9BQQ3 440 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms