RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 DHX16O60231 1041 aaKnown RBP18.89■□□□□ 0.61
COL18A1-205ENST00000423214 EDNRBP24530 442 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 NUCB1Q02818 461 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 IMMTQ16891 758 aaKnown RBP18.89■□□□□ 0.61
COL18A1-205ENST00000423214 ASPRV1Q53RT3 343 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 SCLYQ96I15 445 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 UBA5Q9GZZ9 404 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 CPVLQ9H3G5 476 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 PRDM12Q9H4Q4 367 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 TRMT13Q9NUP7 481 aaKnown RBP18.89■□□□□ 0.61
COL18A1-205ENST00000423214 CXXC1Q9P0U4 656 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-205ENST00000423214 PTPRSQ13332 1948 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 ABCB11O95342 1321 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 TET1Q8NFU7 2136 aa18.88■□□□□ 0.61
COL18A1-205ENST00000423214 PFKMP08237 780 aa18.88■□□□□ 0.61
COL18A1-205ENST00000423214 TXNP10599 105 aaKnown RBP18.88■□□□□ 0.61
COL18A1-205ENST00000423214 TTLL4Q14679 1199 aa18.88■□□□□ 0.61
COL18A1-205ENST00000423214 ZSCAN10Q96SZ4 725 aaPredicted RBP18.88■□□□□ 0.61
COL18A1-205ENST00000423214 DSCC1Q9BVC3 393 aa18.88■□□□□ 0.61
COL18A1-205ENST00000423214 NKX2-4Q9H2Z4 354 aa18.88■□□□□ 0.61
COL18A1-205ENST00000423214 SLC28A3Q9HAS3 691 aa18.88■□□□□ 0.61
COL18A1-205ENST00000423214 CHD9Q3L8U1 2897 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 KPNA6O60684 536 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 CYP2C9P11712 490 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 ADGRF4Q8IZF3 695 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 USP38Q8NB14 1042 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 COPS5Q92905 334 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 UBAC1Q9BSL1 405 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 KRT23Q9C075 422 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 CNNM2Q9H8M5 875 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 CTNNA3Q9UI47 895 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 BAZ2BQ9UIF8 2168 aaKnown RBP18.87■□□□□ 0.61
COL18A1-205ENST00000423214 SLC4A7Q9Y6M7 1214 aa18.87■□□□□ 0.61
COL18A1-205ENST00000423214 IGHDP01880 384 aa18.86■□□□□ 0.61
COL18A1-205ENST00000423214 PARP1P09874 1014 aaKnown RBP18.86■□□□□ 0.61
COL18A1-205ENST00000423214 NBPF20Q3BBV1 942 aa18.86■□□□□ 0.61
COL18A1-205ENST00000423214 ENAHQ8N8S7 591 aaPredicted RBP18.86■□□□□ 0.61
COL18A1-205ENST00000423214 RGS22Q8NE09 1264 aa18.86■□□□□ 0.61
COL18A1-205ENST00000423214 PPM1EQ8WY54 764 aa18.86■□□□□ 0.61
COL18A1-205ENST00000423214 SYMPKQ92797 1274 aaKnown RBP18.86■□□□□ 0.61
COL18A1-205ENST00000423214 MAF1Q9H063 256 aa18.86■□□□□ 0.61
COL18A1-205ENST00000423214 NOD1Q9Y239 953 aa18.86■□□□□ 0.61
COL18A1-205ENST00000423214 COL4A4P53420 1690 aaPredicted RBP18.85■□□□□ 0.61
COL18A1-205ENST00000423214 TTC28Q96AY4 2481 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 SPTBN5Q9NRC6 3674 aaKnown RBP18.85■□□□□ 0.61
COL18A1-205ENST00000423214 A6NJR5 290 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 ACTN1P12814 892 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 CHMP4BP1P59074 171 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 QRICH1Q2TAL8 776 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 PPP2R2DQ66LE6 453 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 NFRKBQ6P4R8 1299 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 DEFB128Q7Z7B8 93 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 FBXO11Q86XK2 927 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 MCF2L2Q86YR7 1114 aa18.85■□□□□ 0.61
COL18A1-205ENST00000423214 DOCK5Q9H7D0 1870 aa18.84■□□□□ 0.61
COL18A1-205ENST00000423214 ARIH2O95376 493 aa18.84■□□□□ 0.61
COL18A1-205ENST00000423214 ATP2A2P16615 1042 aaKnown RBP18.84■□□□□ 0.61
COL18A1-205ENST00000423214 IGFBP4P22692 258 aa18.84■□□□□ 0.61
COL18A1-205ENST00000423214 PTPN11Q06124 597 aaPredicted RBP18.84■□□□□ 0.61
COL18A1-205ENST00000423214 IFIT1BQ5T764 474 aaKnown RBP18.84■□□□□ 0.61
COL18A1-205ENST00000423214 NSUN6Q8TEA1 469 aaKnown RBP18.84■□□□□ 0.61
COL18A1-205ENST00000423214 ZSWIM5Q9P217 1185 aa18.84■□□□□ 0.61
COL18A1-205ENST00000423214 YBX2Q9Y2T7 364 aaKnown RBP18.84■□□□□ 0.61
COL18A1-205ENST00000423214 MRPL11Q9Y3B7 192 aaKnown RBP18.84■□□□□ 0.61
COL18A1-205ENST00000423214 CHD7Q9P2D1 2997 aa18.84■□□□□ 0.61
COL18A1-205ENST00000423214 PITPNM1O00562 1244 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 GH1P01241 217 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 RFC2P35250 354 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 RABGGTBP53611 331 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 IRX6P78412 446 aaPredicted RBP18.83■□□□□ 0.6
COL18A1-205ENST00000423214 STXBP2Q15833 593 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 SEPT14Q6ZU15 432 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 CCDC155Q8N6L0 562 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 RETREG2Q8NC44 543 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 SYTL5Q8TDW5 730 aaPredicted RBP18.83■□□□□ 0.6
COL18A1-205ENST00000423214 PPP1R13LQ8WUF5 828 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 ANKS1AQ92625 1134 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 RMDN3Q96TC7 470 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 VAT1LQ9HCJ6 419 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 PCDHA11Q9Y5I1 949 aa18.83■□□□□ 0.6
COL18A1-205ENST00000423214 MMP3P08254 477 aa18.82■□□□□ 0.6
COL18A1-205ENST00000423214 EIF2AK2P19525 551 aaKnown RBP18.82■□□□□ 0.6
COL18A1-205ENST00000423214 BFSP2Q13515 415 aa18.82■□□□□ 0.6
COL18A1-205ENST00000423214 TJAP1Q5JTD0 557 aa18.82■□□□□ 0.6
COL18A1-205ENST00000423214 ARHGEF16Q5VV41 709 aa18.82■□□□□ 0.6
COL18A1-205ENST00000423214 CHST3Q7LGC8 479 aa18.82■□□□□ 0.6
COL18A1-205ENST00000423214 TAAR1Q96RJ0 339 aa18.82■□□□□ 0.6
COL18A1-205ENST00000423214 IWS1Q96ST2 819 aa18.82■□□□□ 0.6
COL18A1-205ENST00000423214 COL20A1Q9P218 1284 aa18.82■□□□□ 0.6
COL18A1-205ENST00000423214 CFBP00751 764 aa18.81■□□□□ 0.6
COL18A1-205ENST00000423214 LY6KQ17RY6 165 aa18.81■□□□□ 0.6
COL18A1-205ENST00000423214 AFG1LQ8WV93 481 aa18.81■□□□□ 0.6
COL18A1-205ENST00000423214 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
COL18A1-205ENST00000423214 FTOQ9C0B1 505 aaKnown RBP eCLIP18.81■□□□□ 0.61e-6■■■■■ 39.4
COL18A1-205ENST00000423214 JMJD4Q9H9V9 463 aa18.81■□□□□ 0.6
COL18A1-205ENST00000423214 THEGQ9P2T0 379 aa18.81■□□□□ 0.6
COL18A1-205ENST00000423214 MICAL3Q7RTP6 2002 aa18.8■□□□□ 0.6
COL18A1-205ENST00000423214 ARHGAP1Q07960 439 aa18.8■□□□□ 0.6
COL18A1-205ENST00000423214 TRDNQ13061 729 aa18.8■□□□□ 0.6
COL18A1-205ENST00000423214 PTGISQ16647 500 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms