RNA–Protein interactions for RNA: ENST00000423035.5

PGAP1-206, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 1 (best)

Gene PGAP1, Length 8,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-206ENST00000423035 TRIM42Q8IWZ5 723 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 ENOX1Q8TC92 643 aaKnown RBP4.78□□□□□ -1.64
PGAP1-206ENST00000423035 SH3TC2Q8TF17 1288 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 KIAA1143Q96AT1 154 aaPredicted RBP4.78□□□□□ -1.64
PGAP1-206ENST00000423035 VPS39Q96JC1 886 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 VCX3AQ9NNX9 186 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 FGD6Q6ZV73 1430 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 VPS37CA5D8V6 355 aaPredicted RBP4.78□□□□□ -1.64
PGAP1-206ENST00000423035 TNNI2P48788 182 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 CKAP4Q07065 602 aaKnown RBP4.78□□□□□ -1.64
PGAP1-206ENST00000423035 COTL1Q14019 142 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 SKIDA1Q1XH10 827 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 TDRD7Q8NHU6 1098 aaKnown RBP4.78□□□□□ -1.64
PGAP1-206ENST00000423035 GABPB2Q8TAK5 448 aaPredicted RBP4.78□□□□□ -1.64
PGAP1-206ENST00000423035 IFNKQ9P0W0 207 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 TLK1Q9UKI8 766 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 MCF2LO15068 1137 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 GNPATO15228 680 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 HADHAP40939 763 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 LACTBP83111 547 aaPredicted RBP4.78□□□□□ -1.64
PGAP1-206ENST00000423035 KRT73Q86Y46 540 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 SETD6Q8TBK2 473 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 CCDC28BQ9BUN5 200 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 TBX22Q9Y458 520 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 OPA1O60313 960 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 PRPF6O94906 941 aaKnown RBP4.78□□□□□ -1.64
PGAP1-206ENST00000423035 FCGR1AP12314 374 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 TNFAIP3P21580 790 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 MRPS15P82914 257 aaKnown RBP4.78□□□□□ -1.64
PGAP1-206ENST00000423035 COG2Q14746 738 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 ANKRD35Q8N283 1001 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 INPP5DQ92835 1189 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 TTC17Q96AE7 1141 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 HAUS1Q96CS2 278 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 FAM204AQ9H8W3 233 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 RRP7BPQ9NSQ0 103 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 TMEM5Q9Y2B1 443 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 FHOD1Q9Y613 1164 aa4.78□□□□□ -1.64
PGAP1-206ENST00000423035 A0A1W2PRQ8 180 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 VSTM5A8MXK1 200 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 TMEM232C9JQI7 657 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 ATP2A2P16615 1042 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 RAP1GDS1P52306 607 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 RGL3Q3MIN7 710 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 ZNF394Q53GI3 561 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 FAM186BQ8IYM0 893 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 ARL6IP6Q8N6S5 226 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 KCNB2Q92953 911 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 ZNF653Q96CK0 615 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 STAMBPL1Q96FJ0 436 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 FRMD6Q96NE9 622 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 MPHOSPH8Q99549 860 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 TUBGCP2Q9BSJ2 902 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 CARD6Q9BX69 1037 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 TXLNGQ9NUQ3 528 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 DTNAQ9Y4J8 743 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 MOCS3O95396 460 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 MSH2P43246 934 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 NOP14P78316 857 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 SNAP47Q5SQN1 464 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 NEK5Q6P3R8 708 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 PIGKQ92643 395 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 ACSBG1Q96GR2 724 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 FBRSL1Q9HCM7 1045 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 MRPL22Q9NWU5 206 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 RHBDL2Q9NX52 303 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 PLEKHG1Q9ULL1 1385 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 SPATA31A6Q5VVP1 1343 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 IRS4O14654 1257 aaPredicted RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 MSH5O43196 834 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 ARHGEF9O43307 516 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 SMNDC1O75940 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 NFKBIAP25963 317 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 NEK3P51956 506 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 BFSP2Q13515 415 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 BTG3Q14201 252 aaPredicted RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 TAZQ16635 292 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 COPS6Q7L5N1 327 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 VSIG1Q86XK7 387 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 CCDC155Q8N6L0 562 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 SLC17A8Q8NDX2 589 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 RAPGEF4Q8WZA2 1011 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 CLIP3Q96DZ5 547 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 EIF2AQ9BY44 585 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 GPCPD1Q9NPB8 672 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 LRRC9Q6ZRR7 1453 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 GTPBP10A4D1E9 387 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 HMX3A6NHT5 357 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 EIF3CLB5ME19 914 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 BUB1O43683 1085 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 FGFR1OPO95684 399 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 SMARCA1P28370 1054 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 TBX4P57082 545 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 BNC1Q01954 994 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 PRKG2Q13237 762 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 CEP55Q53EZ4 464 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 ZC3H18Q86VM9 953 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 RNASE11Q8TAA1 199 aaKnown RBP4.77□□□□□ -1.65
PGAP1-206ENST00000423035 SUN5Q8TC36 379 aa4.77□□□□□ -1.65
PGAP1-206ENST00000423035 TBC1D5Q92609 795 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms