RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 PDE4DQ08499 809 aa24.72■■□□□ 1.55
CPNE1-211ENST00000420363 TAPT1Q6NXT6 567 aa24.72■■□□□ 1.55
CPNE1-211ENST00000420363 KLHDC9Q8NEP7 349 aa24.72■■□□□ 1.55
CPNE1-211ENST00000420363 NSUN6Q8TEA1 469 aaKnown RBP24.72■■□□□ 1.55
CPNE1-211ENST00000420363 TSEN34Q9BSV6 310 aaKnown RBP24.72■■□□□ 1.55
CPNE1-211ENST00000420363 SPC25Q9HBM1 224 aa24.72■■□□□ 1.55
CPNE1-211ENST00000420363 COL20A1Q9P218 1284 aa24.72■■□□□ 1.55
CPNE1-211ENST00000420363 BRPF3Q9ULD4 1205 aa24.72■■□□□ 1.55
CPNE1-211ENST00000420363 KLF18A0A0U1RQI7 1052 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 CFBP00751 764 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 CASTP20810 708 aaKnown RBP24.71■■□□□ 1.55
CPNE1-211ENST00000420363 GJA9P57773 515 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 TNFAIP2Q03169 654 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 PPP2R5BQ15173 497 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 TRIM60Q495X7 471 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 IQSEC1Q6DN90 963 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 Q6ZUG5 572 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 TBC1D5Q92609 795 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 IWS1Q96ST2 819 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 TM6SF1Q9BZW5 370 aa24.71■■□□□ 1.55
CPNE1-211ENST00000420363 GNEQ9Y223 722 aaKnown RBP24.71■■□□□ 1.55
CPNE1-211ENST00000420363 CNTNAP5Q8WYK1 1306 aa24.7■■□□□ 1.54
CPNE1-211ENST00000420363 RBM47A0AV96 593 aaKnown RBP24.7■■□□□ 1.54
CPNE1-211ENST00000420363 CPA1P15085 419 aa24.7■■□□□ 1.54
CPNE1-211ENST00000420363 RTN1Q16799 776 aa24.7■■□□□ 1.54
CPNE1-211ENST00000420363 C1orf53Q5VUE5 145 aa24.7■■□□□ 1.54
CPNE1-211ENST00000420363 RAB11FIP4Q86YS3 637 aa24.7■■□□□ 1.54
CPNE1-211ENST00000420363 RMDN3Q96TC7 470 aa24.7■■□□□ 1.54
CPNE1-211ENST00000420363 ZSWIM6Q9HCJ5 1215 aa24.7■■□□□ 1.54
CPNE1-211ENST00000420363 Q9Y3F1 56 aa24.7■■□□□ 1.54
CPNE1-211ENST00000420363 DDX49Q9Y6V7 483 aaKnown RBP24.7■■□□□ 1.54
CPNE1-211ENST00000420363 KIAA1217Q5T5P2 1943 aa24.69■■□□□ 1.54
CPNE1-211ENST00000420363 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-211ENST00000420363 MOXD2PA6NHM9 499 aa24.69■■□□□ 1.54
CPNE1-211ENST00000420363 GOLGA8AA7E2F4 631 aa24.69■■□□□ 1.54
CPNE1-211ENST00000420363 GOLGA8BA8MQT2 603 aa24.69■■□□□ 1.54
CPNE1-211ENST00000420363 SNX17Q15036 470 aa24.69■■□□□ 1.54
CPNE1-211ENST00000420363 CCSAPQ6IQ19 270 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-211ENST00000420363 RUFY3Q7L099 469 aa24.69■■□□□ 1.54
CPNE1-211ENST00000420363 TAAR1Q96RJ0 339 aa24.69■■□□□ 1.54
CPNE1-211ENST00000420363 GCOM1H8Y6P7 765 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-211ENST00000420363 POLR2MP0CAP2 368 aa24.68■■□□□ 1.54
CPNE1-211ENST00000420363 DUSP28Q4G0W2 176 aa24.68■■□□□ 1.54
CPNE1-211ENST00000420363 EEPD1Q7L9B9 569 aa24.68■■□□□ 1.54
CPNE1-211ENST00000420363 TLK2Q86UE8 772 aa24.68■■□□□ 1.54
CPNE1-211ENST00000420363 PCSK9Q8NBP7 692 aaKnown RBP24.68■■□□□ 1.54
CPNE1-211ENST00000420363 SCFD2Q8WU76 684 aa24.68■■□□□ 1.54
CPNE1-211ENST00000420363 BRF1Q92994 677 aa24.68■■□□□ 1.54
CPNE1-211ENST00000420363 PXMP2Q9NR77 195 aa24.68■■□□□ 1.54
CPNE1-211ENST00000420363 PDGFCQ9NRA1 345 aa24.68■■□□□ 1.54
CPNE1-211ENST00000420363 A0A0C4DFX4 3053 aa24.67■■□□□ 1.54
CPNE1-211ENST00000420363 CCDC196A0A1B0GTZ2 297 aa24.67■■□□□ 1.54
CPNE1-211ENST00000420363 C6orf222P0C671 652 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-211ENST00000420363 SMPD1P17405 629 aa24.67■■□□□ 1.54
CPNE1-211ENST00000420363 ANAPC15P60006 121 aa24.67■■□□□ 1.54
CPNE1-211ENST00000420363 FAM109BQ6ICB4 259 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-211ENST00000420363 CMTR1Q8N1G2 835 aaKnown RBP24.67■■□□□ 1.54
CPNE1-211ENST00000420363 BADQ92934 168 aa24.67■■□□□ 1.54
CPNE1-211ENST00000420363 CYP46A1Q9Y6A2 500 aa24.67■■□□□ 1.54
CPNE1-211ENST00000420363 FRMPD4Q14CM0 1322 aa24.66■■□□□ 1.54
CPNE1-211ENST00000420363 A0A1W2PQ45 241 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-211ENST00000420363 A0A1W2PQY0 241 aa24.66■■□□□ 1.54
CPNE1-211ENST00000420363 NKRFO15226 690 aaKnown RBP eCLIP24.66■■□□□ 1.54
CPNE1-211ENST00000420363 METAP2P50579 478 aaKnown RBP eCLIP24.66■■□□□ 1.54
CPNE1-211ENST00000420363 EVCP57679 992 aa24.66■■□□□ 1.54
CPNE1-211ENST00000420363 TLE2Q04725 743 aa24.66■■□□□ 1.54
CPNE1-211ENST00000420363 APOBRQ0VD83 1088 aa24.66■■□□□ 1.54
CPNE1-211ENST00000420363 FUT2Q10981 343 aa24.66■■□□□ 1.54
CPNE1-211ENST00000420363 ARHGEF16Q5VV41 709 aa24.66■■□□□ 1.54
CPNE1-211ENST00000420363 PIBF1Q8WXW3 757 aa24.66■■□□□ 1.54
CPNE1-211ENST00000420363 MYADML2A6NDP7 307 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 hCG_1984214I3L0E3 225 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 PIK3CDO00329 1044 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 CTAGE5O15320 804 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 SHHQ15465 462 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 STXBP2Q15833 593 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 NOL8Q76FK4 1167 aaKnown RBP24.65■■□□□ 1.54
CPNE1-211ENST00000420363 TEX2Q8IWB9 1127 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 ZNF713Q8N859 430 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-211ENST00000420363 PDCD2LQ9BRP1 358 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 WDR11Q9BZH6 1224 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 PDLIM7Q9NR12 457 aa24.65■■□□□ 1.54
CPNE1-211ENST00000420363 FAM217BQ9NTX9 383 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-211ENST00000420363 TRIM43BA6NCK2 446 aa24.64■■□□□ 1.54
CPNE1-211ENST00000420363 EIF2AK2P19525 551 aaKnown RBP24.64■■□□□ 1.54
CPNE1-211ENST00000420363 HOXA13P31271 388 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-211ENST00000420363 ACLYP53396 1101 aa24.64■■□□□ 1.54
CPNE1-211ENST00000420363 KCNA10Q16322 511 aa24.64■■□□□ 1.54
CPNE1-211ENST00000420363 SH3RF1Q7Z6J0 888 aa24.64■■□□□ 1.54
CPNE1-211ENST00000420363 TRIM43Q96BQ3 446 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-211ENST00000420363 IL17RAQ96F46 866 aa24.64■■□□□ 1.54
CPNE1-211ENST00000420363 FAM161BQ96MY7 647 aa24.64■■□□□ 1.54
CPNE1-211ENST00000420363 AP5M1Q9H0R1 490 aa24.64■■□□□ 1.54
CPNE1-211ENST00000420363 NR3C2P08235 984 aa24.63■■□□□ 1.53
CPNE1-211ENST00000420363 CDC27P30260 824 aa24.63■■□□□ 1.53
CPNE1-211ENST00000420363 TTLL4Q14679 1199 aa24.63■■□□□ 1.53
CPNE1-211ENST00000420363 FSCN1Q16658 493 aaKnown RBP24.63■■□□□ 1.53
CPNE1-211ENST00000420363 PPP1R18Q6NYC8 613 aa24.63■■□□□ 1.53
CPNE1-211ENST00000420363 CCDC82Q8N4S0 544 aa24.63■■□□□ 1.53
CPNE1-211ENST00000420363 CUL5Q93034 780 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms