RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 EIF2AK2P19525 551 aaKnown RBP23.29■■□□□ 1.32
EGFR-204ENST00000420316 NLRP5P59047 1200 aa23.29■■□□□ 1.32
EGFR-204ENST00000420316 GUCY1B3Q02153 619 aa23.29■■□□□ 1.32
EGFR-204ENST00000420316 PPP1R18Q6NYC8 613 aa23.29■■□□□ 1.32
EGFR-204ENST00000420316 HSCBQ8IWL3 235 aa23.29■■□□□ 1.32
EGFR-204ENST00000420316 CUL5Q93034 780 aa23.29■■□□□ 1.32
EGFR-204ENST00000420316 HMX1Q9NP08 348 aaPredicted RBP23.29■■□□□ 1.32
EGFR-204ENST00000420316 CCL5P13501 91 aa23.28■■□□□ 1.32
EGFR-204ENST00000420316 JAKMIP3Q5VZ66 844 aa23.28■■□□□ 1.32
EGFR-204ENST00000420316 EEPD1Q7L9B9 569 aa23.28■■□□□ 1.32
EGFR-204ENST00000420316 TEX2Q8IWB9 1127 aa23.28■■□□□ 1.32
EGFR-204ENST00000420316 RMDN3Q96TC7 470 aa23.28■■□□□ 1.32
EGFR-204ENST00000420316 SNAI1O95863 264 aaPredicted RBP23.27■■□□□ 1.32
EGFR-204ENST00000420316 CUL4AQ13619 759 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 ARMCX2Q7L311 632 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 SPRYD3Q8NCJ5 442 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 IL31RAQ8NI17 732 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 TMEM106CQ9BVX2 250 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 ZMYND12Q9H0C1 365 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 RNF208Q9H0X6 261 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 UNC93B1Q9H1C4 597 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 C6orf50Q9HD87 102 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 PIK3CDO00329 1044 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 CYBAP13498 195 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 GJB2P29033 226 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 ARHGEF16Q5VV41 709 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 FAM184AQ8NB25 1140 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 CCDC148Q8NFR7 591 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 MORC4Q8TE76 937 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 CCDC12Q8WUD4 166 aaPredicted RBP23.27■■□□□ 1.32
EGFR-204ENST00000420316 PXMP2Q9NR77 195 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 CNPY2Q9Y2B0 182 aa23.27■■□□□ 1.32
EGFR-204ENST00000420316 CCDC85CA6NKD9 419 aa23.26■■□□□ 1.31
EGFR-204ENST00000420316 LRRC37A2A6NM11 1700 aa23.26■■□□□ 1.31
EGFR-204ENST00000420316 B4DLN1 442 aa23.26■■□□□ 1.31
EGFR-204ENST00000420316 MRPL12P52815 198 aaKnown RBP23.26■■□□□ 1.31
EGFR-204ENST00000420316 TRPV1Q8NER1 839 aa23.26■■□□□ 1.31
EGFR-204ENST00000420316 NSUN6Q8TEA1 469 aaKnown RBP23.26■■□□□ 1.31
EGFR-204ENST00000420316 WASF1Q92558 559 aa23.26■■□□□ 1.31
EGFR-204ENST00000420316 MPHOSPH6Q99547 160 aaKnown RBP23.26■■□□□ 1.31
EGFR-204ENST00000420316 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.26■■□□□ 1.314e-6■■■■■ 39.7
EGFR-204ENST00000420316 ABHD16BQ9H3Z7 469 aa23.26■■□□□ 1.31
EGFR-204ENST00000420316 PAK6Q9NQU5 681 aaPredicted RBP23.26■■□□□ 1.31
EGFR-204ENST00000420316 SH3GLB2Q9NR46 395 aa23.26■■□□□ 1.31
EGFR-204ENST00000420316 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.26■■□□□ 1.31
EGFR-204ENST00000420316 GJB1P08034 283 aa23.25■■□□□ 1.31
EGFR-204ENST00000420316 CCND3P30281 292 aaPredicted RBP23.25■■□□□ 1.31
EGFR-204ENST00000420316 NPY5RQ15761 445 aa23.25■■□□□ 1.31
EGFR-204ENST00000420316 PHF20Q9BVI0 1012 aa23.25■■□□□ 1.31
EGFR-204ENST00000420316 PCDHA6Q9UN73 950 aa23.25■■□□□ 1.31
EGFR-204ENST00000420316 SMC3Q9UQE7 1217 aa23.25■■□□□ 1.31
EGFR-204ENST00000420316 PCDHA8Q9Y5H6 950 aa23.25■■□□□ 1.31
EGFR-204ENST00000420316 ESYT2A0FGR8 921 aa23.24■■□□□ 1.31
EGFR-204ENST00000420316 MYCLP12524 364 aaPredicted RBP23.24■■□□□ 1.31
EGFR-204ENST00000420316 EDNRBP24530 442 aa23.24■■□□□ 1.31
EGFR-204ENST00000420316 HMGN5P82970 282 aaKnown RBP23.24■■□□□ 1.31
EGFR-204ENST00000420316 OXER1Q8TDS5 423 aa23.24■■□□□ 1.31
EGFR-204ENST00000420316 IWS1Q96ST2 819 aa23.24■■□□□ 1.31
EGFR-204ENST00000420316 GLT8D2Q9H1C3 349 aa23.24■■□□□ 1.31
EGFR-204ENST00000420316 ZNF865P0CJ78 1059 aaPredicted RBP23.23■■□□□ 1.31
EGFR-204ENST00000420316 CLK2P49760 499 aaKnown RBP23.23■■□□□ 1.31
EGFR-204ENST00000420316 KRT40Q6A162 431 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 FBXO16Q8IX29 292 aaPredicted RBP23.23■■□□□ 1.31
EGFR-204ENST00000420316 PDCD2LQ9BRP1 358 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 ZHX1Q9UKY1 873 aaPredicted RBP23.23■■□□□ 1.31
EGFR-204ENST00000420316 PCDHA4Q9UN74 947 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 BRCA2P51587 3418 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 CAPN2P17655 700 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 CNGA1P29973 690 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 GNA11P29992 359 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 PDE4DQ08499 809 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 ACVR2BQ13705 512 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 PGM5Q15124 567 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 ANO1Q5XXA6 986 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 BLIDQ8IZY5 108 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 REXO1Q8N1G1 1221 aaKnown RBP23.23■■□□□ 1.31
EGFR-204ENST00000420316 C8orf76Q96K31 380 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 KATNBL1Q9H079 304 aa23.23■■□□□ 1.31
EGFR-204ENST00000420316 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.23■■□□□ 1.31
EGFR-204ENST00000420316 SPDYE3A6NKU9 549 aa23.22■■□□□ 1.31
EGFR-204ENST00000420316 SEPT4O43236 478 aa23.22■■□□□ 1.31
EGFR-204ENST00000420316 MSCO60682 206 aa23.22■■□□□ 1.31
EGFR-204ENST00000420316 NR3C2P08235 984 aa23.22■■□□□ 1.31
EGFR-204ENST00000420316 XBP1P17861 261 aa23.22■■□□□ 1.31
EGFR-204ENST00000420316 PTGS1P23219 599 aa23.22■■□□□ 1.31
EGFR-204ENST00000420316 FAM177A1Q8N128 213 aaPredicted RBP23.22■■□□□ 1.31
EGFR-204ENST00000420316 ANO3Q9BYT9 981 aa23.22■■□□□ 1.31
EGFR-204ENST00000420316 PDGFCQ9NRA1 345 aa23.22■■□□□ 1.31
EGFR-204ENST00000420316 GJA8P48165 433 aa23.21■■□□□ 1.31
EGFR-204ENST00000420316 TRIM29Q14134 588 aa23.21■■□□□ 1.31
EGFR-204ENST00000420316 TMEM63BQ5T3F8 832 aa23.21■■□□□ 1.31
EGFR-204ENST00000420316 LENG1Q96BZ8 264 aaPredicted RBP23.21■■□□□ 1.31
EGFR-204ENST00000420316 DEFB118Q96PH6 123 aa23.21■■□□□ 1.31
EGFR-204ENST00000420316 SGPL1O95470 568 aa23.2■■□□□ 1.3
EGFR-204ENST00000420316 NR5A1Q13285 461 aa23.2■■□□□ 1.3
EGFR-204ENST00000420316 VTA1Q9NP79 307 aa23.2■■□□□ 1.3
EGFR-204ENST00000420316 RTEL1Q9NZ71 1219 aa23.2■■□□□ 1.3
EGFR-204ENST00000420316 DDX20Q9UHI6 824 aaKnown RBP23.2■■□□□ 1.3
EGFR-204ENST00000420316 MYH7BA7E2Y1 1941 aa23.2■■□□□ 1.3
EGFR-204ENST00000420316 LHX8Q68G74 356 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms