RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 PRPF3O43395 683 aaKnown RBP19.33■□□□□ 0.69
PMS1-206ENST00000418224 NLRP5P59047 1200 aa19.33■□□□□ 0.69
PMS1-206ENST00000418224 SPA17Q15506 151 aa19.33■□□□□ 0.69
PMS1-206ENST00000418224 MSL1Q68DK7 614 aa19.33■□□□□ 0.69
PMS1-206ENST00000418224 CAPN11Q9UMQ6 739 aa19.33■□□□□ 0.69
PMS1-206ENST00000418224 MAGEB6P1A0A0J9YX57 407 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 RNASE9P60153 205 aaKnown RBP19.33■□□□□ 0.68
PMS1-206ENST00000418224 PPP1R7Q15435 360 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 TRADDQ15628 312 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 ODF2Q5BJF6 829 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 AP1ARQ63HQ0 302 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 IFT20Q8IY31 132 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 LEMD3Q9Y2U8 911 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 HEXIM1O94992 359 aaKnown RBP19.33■□□□□ 0.68
PMS1-206ENST00000418224 PLEKP08567 350 aaPredicted RBP19.33■□□□□ 0.68
PMS1-206ENST00000418224 RCAN1P53805 252 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 ITGB3BPQ13352 177 aaPredicted RBP19.33■□□□□ 0.68
PMS1-206ENST00000418224 PIK3R5Q8WYR1 880 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 ZBTB10Q96DT7 871 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 SEC16BQ96JE7 1060 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 NOD2Q9HC29 1040 aa19.33■□□□□ 0.68
PMS1-206ENST00000418224 B4DLN1 442 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 KCNB1Q14721 858 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 TMED8Q6PL24 325 aaPredicted RBP19.32■□□□□ 0.68
PMS1-206ENST00000418224 TRIM58Q8NG06 486 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 OR2W6PQ8NHA6 318 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 LMBR1Q8WVP7 490 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 MTRQ99707 1265 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 PLAAQ9Y263 795 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 MYH6P13533 1939 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 GOLGA6L10A6NI86 522 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 ATP2C1P98194 919 aaPredicted RBP19.32■□□□□ 0.68
PMS1-206ENST00000418224 CCDC42Q96M95 316 aa19.32■□□□□ 0.68
PMS1-206ENST00000418224 GTPBP6O43824 516 aaPredicted RBP19.31■□□□□ 0.68
PMS1-206ENST00000418224 RPN1P04843 607 aaKnown RBP19.31■□□□□ 0.68
PMS1-206ENST00000418224 FUT2Q10981 343 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 PNMA8AQ86V59 439 aaPredicted RBP19.31■□□□□ 0.68
PMS1-206ENST00000418224 PARD3BQ8TEW8 1205 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 TCP11Q8WWU5 503 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 L3MBTL1Q9Y468 752 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 ZNF263O14978 683 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 AP1G2O75843 785 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 CYP19A1P11511 503 aaPredicted RBP19.31■□□□□ 0.68
PMS1-206ENST00000418224 PRCPP42785 496 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 KCTD19Q17RG1 926 aaPredicted RBP19.31■□□□□ 0.68
PMS1-206ENST00000418224 IRF2BP1Q8IU81 584 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 CACNA2D3Q8IZS8 1091 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 HVCN1Q96D96 273 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 MTA3Q9BTC8 594 aa19.31■□□□□ 0.68
PMS1-206ENST00000418224 CLTAP09496 248 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 DYNLL1P63167 89 aaKnown RBP19.3■□□□□ 0.68
PMS1-206ENST00000418224 PPP2R5BQ15173 497 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 NBPF20Q3BBV1 942 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 PDXDC2PQ6P474 469 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 MICAL1Q8TDZ2 1067 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 SLC4A9Q96Q91 983 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 PLIN2Q99541 437 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 GGA2Q9UJY4 613 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 HYOU1Q9Y4L1 999 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 LGALS16A8MUM7 142 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 USO1O60763 962 aaKnown RBP19.3■□□□□ 0.68
PMS1-206ENST00000418224 ATP6V1G2O95670 118 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 PAK2Q13177 524 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 ZNF658Q5TYW1 1059 aaPredicted RBP19.3■□□□□ 0.68
PMS1-206ENST00000418224 MAGEC3Q8TD91 643 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 IFIH1Q9BYX4 1025 aaKnown RBP19.3■□□□□ 0.68
PMS1-206ENST00000418224 COL5A2P05997 1499 aaPredicted RBP19.3■□□□□ 0.68
PMS1-206ENST00000418224 NUTM2BA6NNL0 878 aaPredicted RBP19.3■□□□□ 0.68
PMS1-206ENST00000418224 PHF20L1A8MW92 1017 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 NUTM2EB1AL46 878 aaPredicted RBP19.3■□□□□ 0.68
PMS1-206ENST00000418224 HMGB1P1B2RPK0 211 aaPredicted RBP19.3■□□□□ 0.68
PMS1-206ENST00000418224 IGHMBP2P38935 993 aaKnown RBP19.3■□□□□ 0.68
PMS1-206ENST00000418224 STAT6P42226 847 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 CPLX4Q7Z7G2 160 aa19.3■□□□□ 0.68
PMS1-206ENST00000418224 NMT2O60551 498 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 ELF3P78545 371 aaPredicted RBP19.29■□□□□ 0.68
PMS1-206ENST00000418224 SUSD4Q5VX71 490 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 PPP4R3AQ6IN85 833 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 TYW1BQ6NUM6 668 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 RMND1Q9NWS8 449 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 KLHL33A6NCF5 533 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 VEGFAP15692 232 aaPredicted RBP19.29■□□□□ 0.68
PMS1-206ENST00000418224 TCP1P17987 556 aaKnown RBP19.29■□□□□ 0.68
PMS1-206ENST00000418224 SLC8A3P57103 927 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 IFFO1Q0D2I5 559 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 TROAPQ12815 778 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 NPY5RQ15761 445 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 IL17AQ16552 155 aa19.29■□□□□ 0.68
PMS1-206ENST00000418224 EIF4E1BA6NMX2 242 aaKnown RBP19.28■□□□□ 0.68
PMS1-206ENST00000418224 PMS1P54277 932 aaKnown RBP19.28■□□□□ 0.68
PMS1-206ENST00000418224 HLTFQ14527 1009 aaKnown RBP eCLIP19.28■□□□□ 0.681e-6■■■□□ 16.5
PMS1-206ENST00000418224 GLE1Q53GS7 698 aaKnown RBP19.28■□□□□ 0.68
PMS1-206ENST00000418224 TMTC3Q6ZXV5 915 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 SRBD1Q8N5C6 995 aaKnown RBP19.28■□□□□ 0.68
PMS1-206ENST00000418224 TNFRSF25Q93038 417 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 PURBQ96QR8 312 aaKnown RBP19.28■□□□□ 0.68
PMS1-206ENST00000418224 SH3GL3Q99963 347 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 PAPPAQ13219 1627 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 ADAMTS3O15072 1205 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 GYG1P46976 350 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 486.2 ms