RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 NMIQ13287 307 aaPredicted RBP18.25■□□□□ 0.51
SBDSP1-201ENST00000415772 SLC9A7Q96T83 725 aa18.25■□□□□ 0.51
SBDSP1-201ENST00000415772 ZMYM6O95789 1325 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 CCDC171Q6TFL3 1326 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 GBF1Q92538 1859 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 ZNF213O14771 459 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 MYOGP15173 224 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 KCNJ6P48051 423 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 PTPN11Q06124 597 aaPredicted RBP18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 NFRKBQ6P4R8 1299 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 TICAM2Q86XR7 235 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 CLEC4DQ8WXI8 215 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 CDH23Q9H251 3354 aa18.24■□□□□ 0.51
SBDSP1-201ENST00000415772 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
SBDSP1-201ENST00000415772 PITPNM1O00562 1244 aa18.23■□□□□ 0.51
SBDSP1-201ENST00000415772 CA3P07451 260 aa18.23■□□□□ 0.51
SBDSP1-201ENST00000415772 GOLGA8HP0CJ92 632 aa18.23■□□□□ 0.51
SBDSP1-201ENST00000415772 COPS5Q92905 334 aa18.23■□□□□ 0.51
SBDSP1-201ENST00000415772 ZKSCAN3Q9BRR0 538 aa18.23■□□□□ 0.51
SBDSP1-201ENST00000415772 KAT14Q9H8E8 782 aa18.23■□□□□ 0.51
SBDSP1-201ENST00000415772 LCTP09848 1927 aa18.23■□□□□ 0.51
SBDSP1-201ENST00000415772 A6NJR5 290 aa18.22■□□□□ 0.51
SBDSP1-201ENST00000415772 COL9A1P20849 921 aa18.22■□□□□ 0.51
SBDSP1-201ENST00000415772 CHST3Q7LGC8 479 aa18.22■□□□□ 0.51
SBDSP1-201ENST00000415772 MCF2L2Q86YR7 1114 aa18.22■□□□□ 0.51
SBDSP1-201ENST00000415772 PPP1R13LQ8WUF5 828 aa18.22■□□□□ 0.51
SBDSP1-201ENST00000415772 ZBED2Q9BTP6 218 aa18.22■□□□□ 0.51
SBDSP1-201ENST00000415772 CERS4Q9HA82 394 aa18.22■□□□□ 0.51
SBDSP1-201ENST00000415772 ABCB11O95342 1321 aa18.22■□□□□ 0.51
SBDSP1-201ENST00000415772 GH1P01241 217 aa18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 IQCF3P0C7M6 154 aa18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 PTGISQ16647 500 aa18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 SEPT14Q6ZU15 432 aa18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 ZNF589Q86UQ0 364 aaPredicted RBP18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 PHOSPHO2Q8TCD6 241 aa18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 ARNTL2Q8WYA1 636 aa18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 UBA5Q9GZZ9 404 aa18.21■□□□□ 0.51
SBDSP1-201ENST00000415772 BAIAP3O94812 1187 aa18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 CASTP20810 708 aaKnown RBP18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 EDNRBP24530 442 aa18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 STXBP2Q15833 593 aa18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 CDC37Q16543 378 aaPredicted RBP18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 DGKHQ86XP1 1220 aa18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 RGS22Q8NE09 1264 aa18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 NSUN6Q8TEA1 469 aaKnown RBP18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 LNPKQ9C0E8 428 aa18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 DIAPH3Q9NSV4 1193 aa18.2■□□□□ 0.5
SBDSP1-201ENST00000415772 TLL1O43897 1013 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 SNHG28P0DPA3 235 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 NT5C2P49902 561 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 ARHGEF16Q5VV41 709 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 TBC1D10CQ8IV04 446 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 HERC6Q8IVU3 1022 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 CAGE1Q8TC20 777 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 AFG1LQ8WV93 481 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 MAF1Q9H063 256 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 MRPL11Q9Y3B7 192 aaKnown RBP18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 PRUNE2Q8WUY3 3088 aa18.19■□□□□ 0.5
SBDSP1-201ENST00000415772 RFXAPO00287 272 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 KDM4AO75164 1064 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 HDAC1Q13547 482 aaPredicted RBP18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 LY6KQ17RY6 165 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 ASPRV1Q53RT3 343 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 B4GALNT3Q6L9W6 998 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 FBXO11Q86XK2 927 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 C7orf31Q8N865 590 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 AFAP1L1Q8TED9 768 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 IWS1Q96ST2 819 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 RMDN3Q96TC7 470 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 KATNAL1Q9BW62 490 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 CPVLQ9H3G5 476 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 VAT1LQ9HCJ6 419 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 NEDD4P46934 1319 aa18.18■□□□□ 0.5
SBDSP1-201ENST00000415772 ARIH2O95376 493 aa18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 MMP3P08254 477 aa18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 PARP1P09874 1014 aaKnown RBP18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 SDSP20132 328 aa18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 DGKDQ16760 1214 aa18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 IMMTQ16891 758 aaKnown RBP18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 ADGRF4Q8IZF3 695 aa18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 TAAR1Q96RJ0 339 aa18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 UBAC1Q9BSL1 405 aa18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 MRVI1Q9Y6F6 885 aa18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 VCANP13611 3396 aa18.17■□□□□ 0.5
SBDSP1-201ENST00000415772 TANC1Q9C0D5 1861 aa18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 HIP1O00291 1037 aa18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 PARNO95453 639 aaKnown RBP18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 CFBP00751 764 aa18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 SELPP16109 830 aa18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 TFF2Q03403 129 aa18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 CWC27Q6UX04 472 aaKnown RBP18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 LRRC8DQ7L1W4 858 aa18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 SYTL5Q8TDW5 730 aaPredicted RBP18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 ZSCAN10Q96SZ4 725 aaPredicted RBP18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 ALG1Q9BT22 464 aa18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms