RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 MRPL11Q9Y3B7 192 aaKnown RBP11.35□□□□□ -0.59
DDB1-202ENST00000414411 DOCK3Q8IZD9 2030 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 SMCO2A6NFE2 343 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 M0R2N6 131 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 NR1I2O75469 434 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 SLC25A27O95847 323 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 MMP1P03956 469 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 PTMAP06454 111 aaKnown RBP11.35□□□□□ -0.59
DDB1-202ENST00000414411 XBP1P17861 261 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 TYRO3Q06418 890 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 CAMK4Q16566 473 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
DDB1-202ENST00000414411 TEX2Q8IWB9 1127 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 SHCBP1Q8NEM2 672 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 CHST13Q8NET6 341 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 CCDC148Q8NFR7 591 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 TBC1D5Q92609 795 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 PORCNQ9H237 461 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 PSTPIP2Q9H939 334 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 RIC8AQ9NPQ8 531 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 PIK3CDO00329 1044 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 NFIBO00712 420 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 MEIS2O14770 477 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 GTPBP6O43824 516 aaPredicted RBP11.34□□□□□ -0.59
DDB1-202ENST00000414411 OFD1O75665 1012 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 TRPA1O75762 1119 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 ERCC3P19447 782 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 NLRP5P59047 1200 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 GUCY1B3Q02153 619 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 GALNT17Q6IS24 598 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 DAGLBQ8NCG7 672 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 FAM200AQ8TCP9 573 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 ZNF396Q96N95 335 aaPredicted RBP11.34□□□□□ -0.59
DDB1-202ENST00000414411 MAF1Q9H063 256 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 MROH8Q9H579 483 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 HOMER2Q9NSB8 354 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 RNF146Q9NTX7 359 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 RCOR1Q9UKL0 485 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 MRVI1Q9Y6F6 885 aa11.34□□□□□ -0.59
DDB1-202ENST00000414411 ZNFX1Q9P2E3 1918 aaKnown RBP11.34□□□□□ -0.59
DDB1-202ENST00000414411 CALML3P27482 149 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 GNA11P29992 359 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 COPB2P35606 906 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 MRPL12P52815 198 aaKnown RBP11.33□□□□□ -0.6
DDB1-202ENST00000414411 CCNA1P78396 465 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 TRIM29Q14134 588 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 CKAP2LQ8IYA6 745 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 USP28Q96RU2 1077 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 FTOQ9C0B1 505 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDB1-202ENST00000414411 GLT8D2Q9H1C3 349 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 C6orf50Q9HD87 102 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 MAP3K20Q9NYL2 800 aaKnown RBP11.33□□□□□ -0.6
DDB1-202ENST00000414411 FBXO40Q9UH90 709 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 TBC1D8O95759 1140 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 U2AF2P26368 475 aaKnown RBP eCLIP11.33□□□□□ -0.69e-8■■■■■ 32.2
DDB1-202ENST00000414411 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
DDB1-202ENST00000414411 HSD17B4P51659 736 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 ADCY7P51828 1080 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 CEBPZQ03701 1054 aaKnown RBP11.33□□□□□ -0.6
DDB1-202ENST00000414411 USP17L6PQ6QN14 398 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.33□□□□□ -0.6
DDB1-202ENST00000414411 NCAPG2Q86XI2 1143 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 BLIDQ8IZY5 108 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 SAMD3Q8N6K7 520 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 CUL5Q93034 780 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 TNFRSF25Q93038 417 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 ACAD9Q9H845 621 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 EFCC1Q9HA90 598 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 SAGE1Q9NXZ1 904 aa11.33□□□□□ -0.6
DDB1-202ENST00000414411 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDB1-202ENST00000414411 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
DDB1-202ENST00000414411 BTBD18B2RXH4 712 aa11.32□□□□□ -0.6
DDB1-202ENST00000414411 AP5Z1O43299 807 aa11.32□□□□□ -0.6
DDB1-202ENST00000414411 MAP2K1Q02750 393 aaPredicted RBP11.32□□□□□ -0.6
DDB1-202ENST00000414411 MCF2L2Q86YR7 1114 aa11.32□□□□□ -0.6
DDB1-202ENST00000414411 DIS3L2Q8IYB7 885 aaKnown RBP11.32□□□□□ -0.6
DDB1-202ENST00000414411 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
DDB1-202ENST00000414411 FOXP1Q9H334 677 aaPredicted RBP11.32□□□□□ -0.6
DDB1-202ENST00000414411 A1CFQ9NQ94 594 aaKnown RBP11.32□□□□□ -0.6
DDB1-202ENST00000414411 WBP1LQ9NX94 342 aa11.32□□□□□ -0.6
DDB1-202ENST00000414411 GCOM1H8Y6P7 765 aaPredicted RBP11.31□□□□□ -0.6
DDB1-202ENST00000414411 STRNO43815 780 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 CFBP00751 764 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 POLR2MP0CAP2 368 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 MAPK4P31152 587 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 RPS6P62753 249 aaKnown RBP11.31□□□□□ -0.6
DDB1-202ENST00000414411 NR5A1Q13285 461 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 NOM1Q5C9Z4 860 aaKnown RBP11.31□□□□□ -0.6
DDB1-202ENST00000414411 CYP39A1Q9NYL5 469 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 PCDHA6Q9UN73 950 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 KIF28PB7ZC32 967 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 CTGFP29279 349 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 HOXA13P31271 388 aaPredicted RBP11.31□□□□□ -0.6
DDB1-202ENST00000414411 KRT2P35908 639 aa11.31□□□□□ -0.6
DDB1-202ENST00000414411 BAATQ14032 418 aaPredicted RBP11.31□□□□□ -0.6
DDB1-202ENST00000414411 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
DDB1-202ENST00000414411 UBE2SQ16763 222 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms