RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 RBM12Q9NTZ6 932 aaKnown RBP15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 OVOS2A0A0J9YW53 1432 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 OVOS2Q6IE36 1432 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 PPP1R3GB7ZBB8 358 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 CETN3O15182 167 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 CARSP49589 748 aaKnown RBP15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 SEPT2Q15019 361 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 CDKAL1Q5VV42 579 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 TTLL7Q6ZT98 887 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 CCDC65Q8IXS2 484 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 TMX4Q9H1E5 349 aaPredicted RBP15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 CUEDC2Q9H467 287 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 ATG3Q9NT62 314 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 NCAPD2Q15021 1401 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 CD44P16070 742 aaKnown RBP15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 GUCY1A2P33402 732 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 CETN1Q12798 172 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 CLUL1Q15846 466 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 NAIF1Q69YI7 327 aaPredicted RBP15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 AGPAT5Q9NUQ2 364 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 SMARCAL1Q9NZC9 954 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 GBP5Q96PP8 586 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 DISC1Q9NRI5 854 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 TPX2Q9ULW0 747 aaKnown RBP15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 GRID2IPA4D2P6 1211 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 GBP7Q8N8V2 638 aaPredicted RBP15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 CEP120Q8N960 986 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 FMO2Q99518 471 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 AP1M1Q9BXS5 423 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 UTYO14607 1347 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 IKQ13123 557 aaPredicted RBP15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 KRT28Q7Z3Y7 464 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 MIEF2Q96C03 454 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 HOOK2Q96ED9 719 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 KAZALD1Q96I82 304 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 SH2D4AQ9H788 454 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 SKOR1P84550 965 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 TCEAL9Q9UHQ7 104 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 ENO4A6NNW6 628 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 PRPF3O43395 683 aaKnown RBP15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 TRIM37O94972 964 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 EZH2Q15910 746 aaKnown RBP15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 INF2Q27J81 1249 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 PREPLQ4J6C6 727 aaPredicted RBP15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 PROSER2Q86WR7 435 aaPredicted RBP15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 NEK9Q8TD19 979 aa15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 AENQ8WTP8 325 aaKnown RBP15.23■□□□□ 0.03
CLTCL1-201ENST00000412649 SERPING1P05155 500 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 PAX7P23759 505 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 NONOQ15233 471 aaKnown RBP eCLIP15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 UBL4BQ8N7F7 174 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 CUL5Q93034 780 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 FAM167BQ9BTA0 163 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 ANKRD26Q9UPS8 1709 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 H2AFZP0C0S5 128 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 ARID4AP29374 1257 aaPredicted RBP15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 RABL6Q3YEC7 729 aaPredicted RBP15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 ARL6IP4Q66PJ3 421 aaKnown RBP15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 NBPF10Q6P3W6 841 aaKnown RBP15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 LRIG3Q6UXM1 1119 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 H2AFVQ71UI9 128 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 ADAT2Q7Z6V5 191 aaKnown RBP15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 MS4A14Q96JA4 679 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 TBX22Q9Y458 520 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 LRRC53A6NM62 1247 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 TBCAO75347 108 aaKnown RBP15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 SRGNP10124 158 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 PDHBP11177 359 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 GFPT1Q06210 699 aaPredicted RBP15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 KRT25Q7Z3Z0 450 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 MYOCDQ8IZQ8 938 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 NBPF3Q9H094 633 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 NOD2Q9HC29 1040 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 MAP3K15Q6ZN16 1313 aa15.22■□□□□ 0.03
CLTCL1-201ENST00000412649 CCDC188H7C350 402 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 GNA14O95837 355 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 CEBPAP49715 358 aaPredicted RBP15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 ZNF131P52739 623 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 HERVK_113P62684 666 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 NT5DC1Q5TFE4 455 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 NELFCDQ8IXH7 590 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 CCDC105Q8IYK2 499 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 DAAM1Q9Y4D1 1078 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 PHF20L1A8MW92 1017 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 BMP6P22004 513 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 SARSP49591 514 aaKnown RBP15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 DZIP3Q86Y13 1208 aaKnown RBP15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 DNAJC7Q99615 494 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 TMOD1P28289 359 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 PHKA1P46020 1223 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 RPUSD2Q8IZ73 545 aaKnown RBP15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 C3orf20Q8ND61 904 aa15.21■□□□□ 0.03
CLTCL1-201ENST00000412649 NSMCE1Q8WV22 266 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms