RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TMEM95Q3KNT9 176 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 CFAP100Q494V2 611 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 INO80DQ53TQ3 878 aaPredicted RBP6.23□□□□□ -1.41
LSM5-205ENST00000409952 HEATR6Q6AI08 1181 aaKnown RBP6.23□□□□□ -1.41
LSM5-205ENST00000409952 LETMD1Q6P1Q0 360 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 FGD2Q7Z6J4 655 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 PPFIBP1Q86W92 1011 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 PJA1Q8NG27 643 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 DNAJB8Q8NHS0 232 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 PPP1R13LQ8WUF5 828 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 MENTQ9BUN1 341 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 SARGQ9BW04 601 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.23□□□□□ -1.41
LSM5-205ENST00000409952 CASS4Q9NQ75 786 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 PRDM5Q9NQX1 630 aaPredicted RBP6.23□□□□□ -1.41
LSM5-205ENST00000409952 SUCOQ9UBS9 1254 aaKnown RBP6.23□□□□□ -1.41
LSM5-205ENST00000409952 SLC5A6Q9Y289 635 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 LUC7L2Q9Y383 392 aaKnown RBP6.23□□□□□ -1.41
LSM5-205ENST00000409952 ARID1BQ8NFD5 2236 aaPredicted RBP6.23□□□□□ -1.41
LSM5-205ENST00000409952 PYGMP11217 842 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 GRIA2P42262 883 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 HTR3AP46098 478 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 GRB10Q13322 594 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 MINDY4Q4G0A6 757 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 IL31Q6EBC2 164 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 UBE2R2Q712K3 238 aaPredicted RBP6.22□□□□□ -1.41
LSM5-205ENST00000409952 ANKLE2Q86XL3 938 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 SLFN12Q8IYM2 578 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 AGBL5Q8NDL9 886 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 SMARCC1Q92922 1105 aaPredicted RBP6.22□□□□□ -1.41
LSM5-205ENST00000409952 COX4I2Q96KJ9 171 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 SLC6A18Q96N87 628 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 MIPEPQ99797 713 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 KLHL25Q9H0H3 589 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 PPCSQ9HAB8 311 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 TCF7L1Q9HCS4 588 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 FAM86C1Q9NVL1 165 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 APEX2Q9UBZ4 518 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 ANAPC4Q9UJX5 808 aa6.22□□□□□ -1.41
LSM5-205ENST00000409952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.21□□□□□ -1.42
LSM5-205ENST00000409952 ANO9A1A5B4 782 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 B4E1Z4 1266 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 TBX3O15119 743 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 NPHP1O15259 732 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 TP53P04637 393 aaPredicted RBP6.21□□□□□ -1.42
LSM5-205ENST00000409952 ID4P47928 161 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 SCNN1BP51168 640 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 CLCN7P51798 805 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 NEK3P51956 506 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 BNIP3Q12983 259 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 PTPN21Q16825 1174 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 ABCB5Q2M3G0 1257 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 TDRD10Q5VZ19 366 aaKnown RBP6.21□□□□□ -1.42
LSM5-205ENST00000409952 CDCA2Q69YH5 1023 aaPredicted RBP6.21□□□□□ -1.42
LSM5-205ENST00000409952 MCTP1Q6DN14 999 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 ZNF574Q6ZN55 896 aaPredicted RBP6.21□□□□□ -1.42
LSM5-205ENST00000409952 TMEM192Q8IY95 271 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 ZNF513Q8N8E2 541 aaPredicted RBP6.21□□□□□ -1.42
LSM5-205ENST00000409952 FLCNQ8NFG4 579 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 USP33Q8TEY7 942 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 TIFAQ96CG3 184 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 SCLYQ96I15 445 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 HRASLS5Q96KN8 279 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.21□□□□□ -1.42
LSM5-205ENST00000409952 PTPRHQ9HD43 1115 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 CRTAC1Q9NQ79 661 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 PNMA8BQ9ULN7 279 aaPredicted RBP6.21□□□□□ -1.42
LSM5-205ENST00000409952 CAPN6Q9Y6Q1 641 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 PITPNM2Q9BZ72 1349 aa6.21□□□□□ -1.42
LSM5-205ENST00000409952 PRR33A8MZF0 331 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 K7ESF4 209 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 CBFA2T2O43439 604 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 PRKD3O94806 890 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 SNUPNO95149 360 aaKnown RBP6.2□□□□□ -1.42
LSM5-205ENST00000409952 CD8BP10966 210 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 FUT4P22083 530 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 TXKP42681 527 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 YARSP54577 528 aaKnown RBP6.2□□□□□ -1.42
LSM5-205ENST00000409952 FAM83BQ5T0W9 1011 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 SFRP5Q5T4F7 317 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 TPH2Q8IWU9 490 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 FAM13CQ8NE31 585 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 MYRIPQ8NFW9 859 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 CYB5D2Q8WUJ1 264 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 PTPRN2Q92932 1015 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 MAGEB10Q96LZ2 347 aaPredicted RBP6.2□□□□□ -1.42
LSM5-205ENST00000409952 STRBPQ96SI9 672 aaKnown RBP6.2□□□□□ -1.42
LSM5-205ENST00000409952 ORAI3Q9BRQ5 295 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 SLC13A1Q9BZW2 595 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 GBP3Q9H0R5 595 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 SEMA3GQ9NS98 782 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 FBXO9Q9UK97 447 aaPredicted RBP6.2□□□□□ -1.42
LSM5-205ENST00000409952 CEP131Q9UPN4 1083 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 DAAM1Q9Y4D1 1078 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 ST14Q9Y5Y6 855 aa6.2□□□□□ -1.42
LSM5-205ENST00000409952 TCRBV16S1A1N1A0A5B0 115 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 NOP56O00567 594 aaKnown RBP6.19□□□□□ -1.42
LSM5-205ENST00000409952 RGS13O14921 159 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 DLX3O60479 287 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms