RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 C7orf25Q9BPX7 421 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 PSTPIP2Q9H939 334 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 FKBP1AP62942 108 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 ELF2Q15723 593 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 DYMQ7RTS9 669 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 SNX29Q8TEQ0 813 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 CNKSR1Q969H4 720 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 CUEDC2Q9H467 287 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 EXOC1Q9NV70 894 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 DDX25Q9UHL0 483 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 A0A1W2PRG0 241 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 CLRN2A0PK11 232 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 GH2P01242 217 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 ERVK-24P63145 666 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 HDLBPQ00341 1268 aaKnown RBP17■□□□□ 0.31
SCAMP4-202ENST00000409472 TERF2Q15554 542 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 CCDC93Q567U6 631 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 ANKRD40Q6AI12 368 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 KANSL2Q9H9L4 492 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 SLC39A2Q9NP94 309 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 NYAP2Q9P242 653 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 PCDHA1Q9Y5I3 950 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 PSMA7O14818 248 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 NDUFB10O96000 172 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 MYL1P05976 194 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 HMGB2P26583 209 aaKnown RBP17■□□□□ 0.31
SCAMP4-202ENST00000409472 UBXN1Q04323 297 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 SPICE1Q8N0Z3 855 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 MKL1Q969V6 931 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 CALML4Q96GE6 196 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 CAMKK2Q96RR4 588 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 MRIQ9BWK5 157 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 ITIH6Q6UXX5 1313 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 PHLPP2Q6ZVD8 1323 aa17■□□□□ 0.31
SCAMP4-202ENST00000409472 PSME4Q14997 1843 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 TCP10L2B9ZVM9 353 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 F5H6K3 240 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 TULP2O00295 520 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 ABL1P00519 1130 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 KLRC3Q07444 240 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 ORC2Q13416 577 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 ABCB5Q2M3G0 1257 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 USH1GQ495M9 461 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 TEX2Q8IWB9 1127 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 MAGEF1Q9HAY2 307 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 H7C1D1 291 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 RAD17O75943 681 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 SLU7O95391 586 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 KLK7P49862 253 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 SPAG1Q07617 926 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 PPP4R3AQ6IN85 833 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 ACRBPQ8NEB7 543 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 LARP4BQ92615 738 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 CSRNP1Q96S65 589 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 LZTFL1Q9NQ48 299 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 ABHD10Q9NUJ1 306 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 ADGRG1Q9Y653 693 aa16.99■□□□□ 0.31
SCAMP4-202ENST00000409472 ATRNL1Q5VV63 1379 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 B4DLN1 442 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 PES1O00541 588 aaKnown RBP16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 CCP110O43303 1012 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 ECE1P42892 770 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 TMEM266Q2M3C6 531 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 KIAA1755Q5JYT7 1200 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 POTEAQ6S8J7 498 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 TMEM179Q6ZVK1 233 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 KRT222Q8N1A0 295 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 CSGALNACT2Q8N6G5 542 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 DCAF4Q8WV16 495 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 P2RX5Q93086 422 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 SEMA6BQ9H3T3 888 aa16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-202ENST00000409472 LGALS16A8MUM7 142 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 MEIS2O14770 477 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 STAT3P40763 770 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 MRPL12P52815 198 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 GNG11P61952 73 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 ZNF507Q8TCN5 953 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 RAD54LQ92698 747 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 ANO3Q9BYT9 981 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 TMEM119Q4V9L6 283 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 SV2BQ7L1I2 683 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 KIFC2Q96AC6 838 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 ERO1AQ96HE7 468 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 CDK5RAP3Q96JB5 506 aa16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 ZNF277Q9NRM2 450 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCAMP4-202ENST00000409472 CCNE1P24864 410 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 STIM1Q13586 685 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 ERCC6LQ2NKX8 1250 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 CNGA4Q8IV77 575 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 MB21D1Q8N884 522 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 THAP9Q9H5L6 903 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 STK32BQ9NY57 414 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 TTC26A0AVF1 554 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 OPLAHO14841 1288 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms