RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 PCDHA11Q9Y5I1 949 aa22.73■■□□□ 1.23
HDAC11-205ENST00000404548 HIP1O00291 1037 aa22.72■■□□□ 1.23
HDAC11-205ENST00000404548 TTLL4Q14679 1199 aa22.72■■□□□ 1.23
HDAC11-205ENST00000404548 CHD1LQ86WJ1 897 aa22.72■■□□□ 1.23
HDAC11-205ENST00000404548 PLEKHM2Q8IWE5 1019 aa22.72■■□□□ 1.23
HDAC11-205ENST00000404548 PNMA1Q8ND90 353 aa22.72■■□□□ 1.23
HDAC11-205ENST00000404548 ATXN2LQ8WWM7 1075 aaKnown RBP22.72■■□□□ 1.23
HDAC11-205ENST00000404548 YBX2Q9Y2T7 364 aaKnown RBP22.72■■□□□ 1.23
HDAC11-205ENST00000404548 ABCB11O95342 1321 aa22.72■■□□□ 1.23
HDAC11-205ENST00000404548 TXNP10599 105 aaKnown RBP22.71■■□□□ 1.23
HDAC11-205ENST00000404548 CYP2C9P11712 490 aa22.71■■□□□ 1.23
HDAC11-205ENST00000404548 NUCB1Q02818 461 aa22.71■■□□□ 1.23
HDAC11-205ENST00000404548 NBPF20Q3BBV1 942 aa22.71■■□□□ 1.23
HDAC11-205ENST00000404548 ASPRV1Q53RT3 343 aa22.71■■□□□ 1.23
HDAC11-205ENST00000404548 SCLYQ96I15 445 aa22.71■■□□□ 1.23
HDAC11-205ENST00000404548 DSCC1Q9BVC3 393 aa22.71■■□□□ 1.23
HDAC11-205ENST00000404548 NKX2-4Q9H2Z4 354 aa22.71■■□□□ 1.23
HDAC11-205ENST00000404548 MYO9BQ13459 2157 aa22.71■■□□□ 1.23
HDAC11-205ENST00000404548 REV3LO60673 3130 aa22.71■■□□□ 1.23
HDAC11-205ENST00000404548 ADGRE1Q14246 886 aa22.7■■□□□ 1.22
HDAC11-205ENST00000404548 CDC37Q16543 378 aaPredicted RBP22.7■■□□□ 1.22
HDAC11-205ENST00000404548 CCDC62Q6P9F0 684 aa22.7■■□□□ 1.22
HDAC11-205ENST00000404548 KAT14Q9H8E8 782 aa22.7■■□□□ 1.22
HDAC11-205ENST00000404548 BDP1A6H8Y1 2624 aa22.7■■□□□ 1.22
HDAC11-205ENST00000404548 NCOR1O75376 2440 aa22.69■■□□□ 1.22
HDAC11-205ENST00000404548 KDM4AO75164 1064 aa22.69■■□□□ 1.22
HDAC11-205ENST00000404548 GOLGA8HP0CJ92 632 aa22.69■■□□□ 1.22
HDAC11-205ENST00000404548 ATP2A2P16615 1042 aaKnown RBP22.69■■□□□ 1.22
HDAC11-205ENST00000404548 USH1GQ495M9 461 aa22.69■■□□□ 1.22
HDAC11-205ENST00000404548 MCF2L2Q86YR7 1114 aa22.69■■□□□ 1.22
HDAC11-205ENST00000404548 NSUN6Q8TEA1 469 aaKnown RBP22.69■■□□□ 1.22
HDAC11-205ENST00000404548 IWS1Q96ST2 819 aa22.69■■□□□ 1.22
HDAC11-205ENST00000404548 ZSCAN10Q96SZ4 725 aaPredicted RBP22.69■■□□□ 1.22
HDAC11-205ENST00000404548 ZKSCAN3Q9BRR0 538 aa22.69■■□□□ 1.22
HDAC11-205ENST00000404548 DIAPH3Q9NSV4 1193 aa22.69■■□□□ 1.22
HDAC11-205ENST00000404548 THEGQ9P2T0 379 aa22.69■■□□□ 1.22
HDAC11-205ENST00000404548 ARIH2O95376 493 aa22.68■■□□□ 1.22
HDAC11-205ENST00000404548 ACTN1P12814 892 aa22.68■■□□□ 1.22
HDAC11-205ENST00000404548 PPP2R2DQ66LE6 453 aa22.68■■□□□ 1.22
HDAC11-205ENST00000404548 CWC27Q6UX04 472 aaKnown RBP22.68■■□□□ 1.22
HDAC11-205ENST00000404548 SESTD1Q86VW0 696 aa22.68■■□□□ 1.22
HDAC11-205ENST00000404548 ADGRF4Q8IZF3 695 aa22.68■■□□□ 1.22
HDAC11-205ENST00000404548 ENAHQ8N8S7 591 aaPredicted RBP22.68■■□□□ 1.22
HDAC11-205ENST00000404548 UBA5Q9GZZ9 404 aa22.68■■□□□ 1.22
HDAC11-205ENST00000404548 PRDM6Q9NQX0 595 aa22.68■■□□□ 1.22
HDAC11-205ENST00000404548 GBF1Q92538 1859 aa22.68■■□□□ 1.22
HDAC11-205ENST00000404548 TANC1Q9C0D5 1861 aa22.67■■□□□ 1.22
HDAC11-205ENST00000404548 ZBBXA8MT70 800 aa22.67■■□□□ 1.22
HDAC11-205ENST00000404548 BFSP2Q13515 415 aa22.67■■□□□ 1.22
HDAC11-205ENST00000404548 IMMTQ16891 758 aaKnown RBP22.67■■□□□ 1.22
HDAC11-205ENST00000404548 FAM47CQ5HY64 1035 aa22.67■■□□□ 1.22
HDAC11-205ENST00000404548 PHOSPHO2Q8TCD6 241 aa22.67■■□□□ 1.22
HDAC11-205ENST00000404548 SYTL5Q8TDW5 730 aaPredicted RBP22.67■■□□□ 1.22
HDAC11-205ENST00000404548 COPS5Q92905 334 aa22.67■■□□□ 1.22
HDAC11-205ENST00000404548 SLC9A7Q96T83 725 aa22.67■■□□□ 1.22
HDAC11-205ENST00000404548 CNNM2Q9H8M5 875 aa22.67■■□□□ 1.22
HDAC11-205ENST00000404548 CTNNA3Q9UI47 895 aa22.67■■□□□ 1.22
HDAC11-205ENST00000404548 IQCF3P0C7M6 154 aa22.66■■□□□ 1.22
HDAC11-205ENST00000404548 GHRHRQ02643 423 aa22.66■■□□□ 1.22
HDAC11-205ENST00000404548 B4GALNT3Q6L9W6 998 aa22.66■■□□□ 1.22
HDAC11-205ENST00000404548 EMID1Q96A84 441 aaPredicted RBP22.66■■□□□ 1.22
HDAC11-205ENST00000404548 KRT23Q9C075 422 aa22.66■■□□□ 1.22
HDAC11-205ENST00000404548 CPVLQ9H3G5 476 aa22.66■■□□□ 1.22
HDAC11-205ENST00000404548 MRPL11Q9Y3B7 192 aaKnown RBP22.66■■□□□ 1.22
HDAC11-205ENST00000404548 GH1P01241 217 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 MMP3P08254 477 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 PARP1P09874 1014 aaKnown RBP22.65■■□□□ 1.22
HDAC11-205ENST00000404548 RABGGTBP53611 331 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 STXBP2Q15833 593 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 QRICH1Q2TAL8 776 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 TMEM67Q5HYA8 995 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 CCDC155Q8N6L0 562 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 RETREG2Q8NC44 543 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 CAGE1Q8TC20 777 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 ASB2Q96Q27 587 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 RMDN3Q96TC7 470 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 ZSWIM5Q9P217 1185 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 COL20A1Q9P218 1284 aa22.65■■□□□ 1.22
HDAC11-205ENST00000404548 B4E1Z4 1266 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 BAIAP3O94812 1187 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 POU3F3P20264 500 aaPredicted RBP22.64■■□□□ 1.21
HDAC11-205ENST00000404548 IGFBP4P22692 258 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 ARHGAP1Q07960 439 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 RBL2Q08999 1139 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 DEFB128Q7Z7B8 93 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 FBXO11Q86XK2 927 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 AFG1LQ8WV93 481 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 TAAR1Q96RJ0 339 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 NOD1Q9Y239 953 aa22.64■■□□□ 1.21
HDAC11-205ENST00000404548 TNFRSF10AO00220 468 aa22.63■■□□□ 1.21
HDAC11-205ENST00000404548 PARNO95453 639 aaKnown RBP22.63■■□□□ 1.21
HDAC11-205ENST00000404548 IGHDP01880 384 aa22.63■■□□□ 1.21
HDAC11-205ENST00000404548 MRPS5P82675 430 aaKnown RBP22.63■■□□□ 1.21
HDAC11-205ENST00000404548 AFAP1L1Q8TED9 768 aa22.63■■□□□ 1.21
HDAC11-205ENST00000404548 PPM1EQ8WY54 764 aa22.63■■□□□ 1.21
HDAC11-205ENST00000404548 TBC1D5Q92609 795 aa22.63■■□□□ 1.21
HDAC11-205ENST00000404548 UBAC1Q9BSL1 405 aa22.63■■□□□ 1.21
HDAC11-205ENST00000404548 JMJD4Q9H9V9 463 aa22.63■■□□□ 1.21
HDAC11-205ENST00000404548 MAP3K20Q9NYL2 800 aaKnown RBP22.63■■□□□ 1.21
HDAC11-205ENST00000404548 EIF3JO75822 258 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms