RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-211ENST00000399355 FAM84AQ96KN4 292 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 NOC4LQ9BVI4 516 aaKnown RBP13.13□□□□□ -0.31
ITSN1-211ENST00000399355 HSPA1LP34931 641 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-211ENST00000399355 LONRF2Q1L5Z9 754 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 NEK8Q86SG6 692 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 TRIML1Q8N9V2 468 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-211ENST00000399355 JMJD4Q9H9V9 463 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 GFPT1Q06210 699 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-211ENST00000399355 RRP1BQ14684 758 aaKnown RBP13.12□□□□□ -0.31
ITSN1-211ENST00000399355 CALCRLQ16602 461 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 MIIPQ5JXC2 388 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 SOGA3Q5TF21 947 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 MAEAQ7L5Y9 396 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 RRP36Q96EU6 259 aaKnown RBP13.12□□□□□ -0.31
ITSN1-211ENST00000399355 EXOC1Q9NV70 894 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 KBTBD4Q9NVX7 518 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 CHMP2AO43633 222 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 ACTN1P12814 892 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 COG1Q8WTW3 980 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 DDX12PQ92771 950 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 MTMR4Q9NYA4 1195 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 LUC7L2Q9Y383 392 aaKnown RBP13.12□□□□□ -0.31
ITSN1-211ENST00000399355 G3V3G9 751 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 TOM1O60784 492 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 MOCS3O95396 460 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 SEPT2Q15019 361 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 LLGL1Q15334 1064 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 TRADDQ15628 312 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 DNAJC21Q5F1R6 531 aaKnown RBP13.12□□□□□ -0.31
ITSN1-211ENST00000399355 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 C16orf86Q6ZW13 317 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 FCHSD1Q86WN1 690 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 FEZ1Q99689 392 aa13.12□□□□□ -0.31
ITSN1-211ENST00000399355 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 RSRC2Q7L4I2 434 aaKnown RBP13.11□□□□□ -0.31
ITSN1-211ENST00000399355 FUT8Q9BYC5 575 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 ZMYND12Q9H0C1 365 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 JADE2Q9NQC1 790 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 LRRN2O75325 713 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 PLS1Q14651 629 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 SMC1AQ14683 1233 aaKnown RBP13.11□□□□□ -0.31
ITSN1-211ENST00000399355 CDC42EP5Q6NZY7 148 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 NOC3LQ8WTT2 800 aaKnown RBP13.11□□□□□ -0.31
ITSN1-211ENST00000399355 HAS1Q92839 578 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 TDRD3Q9H7E2 651 aaKnown RBP13.11□□□□□ -0.31
ITSN1-211ENST00000399355 CHORDC1Q9UHD1 332 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-211ENST00000399355 LRRIQ3A6PVS8 624 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-211ENST00000399355 EFCAB8A8MWE9 144 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 LONP1P36776 959 aaKnown RBP13.11□□□□□ -0.31
ITSN1-211ENST00000399355 ECE1P42892 770 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 RRAGAQ7L523 313 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 KIAA1328Q86T90 577 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 LIMA1Q9UHB6 759 aaKnown RBP13.11□□□□□ -0.31
ITSN1-211ENST00000399355 KIAA1024Q9UPX6 916 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 WNK3Q9BYP7 1800 aa13.11□□□□□ -0.31
ITSN1-211ENST00000399355 CALML3P27482 149 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 SHMT1P34896 483 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 NFRKBQ6P4R8 1299 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 AMOTL1Q8IY63 956 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-211ENST00000399355 EHD4Q9H223 541 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 NHEJ1Q9H9Q4 299 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-211ENST00000399355 MYH7BA7E2Y1 1941 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 CTAGE9A4FU28 777 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 GJB7Q6PEY0 223 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-211ENST00000399355 ZNF507Q8TCN5 953 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 PACSIN1Q9BY11 444 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 VPS18Q9P253 973 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 ARHGAP20Q9P2F6 1191 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 PSMA7O14818 248 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 MYO1BO43795 1136 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 SORBS3O60504 671 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 PABPC4Q13310 644 aaKnown RBP eCLIP13.1□□□□□ -0.31
ITSN1-211ENST00000399355 SPTY2D1Q68D10 685 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-211ENST00000399355 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 ZC3H12CQ9C0D7 883 aaKnown RBP13.1□□□□□ -0.31
ITSN1-211ENST00000399355 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-211ENST00000399355 HYOU1Q9Y4L1 999 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
ITSN1-211ENST00000399355 MMP10P09238 476 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 P2RX5Q93086 422 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 KCND1Q9NSA2 647 aa13.1□□□□□ -0.31
ITSN1-211ENST00000399355 CDK5RAP2Q96SN8 1893 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 LGALS16A8MUM7 142 aa13.09□□□□□ -0.31
ITSN1-211ENST00000399355 SH3BP5LQ7L8J4 393 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms