RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TAF1CQ15572 869 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-204ENST00000397443 DEFB115Q30KQ5 88 aa24.07■■□□□ 1.44
CPNE1-204ENST00000397443 IFNL1Q8IU54 200 aa24.07■■□□□ 1.44
CPNE1-204ENST00000397443 GPRC5AQ8NFJ5 357 aa24.07■■□□□ 1.44
CPNE1-204ENST00000397443 HHIPL1Q96JK4 782 aa24.07■■□□□ 1.44
CPNE1-204ENST00000397443 CREBZFQ9NS37 354 aa24.07■■□□□ 1.44
CPNE1-204ENST00000397443 CYP39A1Q9NYL5 469 aa24.07■■□□□ 1.44
CPNE1-204ENST00000397443 AOC2O75106 756 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 PPP6R2O75170 966 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 BMP15O95972 392 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 EIF2AK2P19525 551 aaKnown RBP24.06■■□□□ 1.44
CPNE1-204ENST00000397443 ZNF76P36508 570 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 HTRA3P83110 453 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 SPECC1Q5M775 1068 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 KRI1Q8N9T8 703 aaKnown RBP24.06■■□□□ 1.44
CPNE1-204ENST00000397443 GTF3C2Q8WUA4 911 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-204ENST00000397443 PORCNQ9H237 461 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 EHMT1Q9H9B1 1298 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 DDX25Q9UHL0 483 aaKnown RBP24.06■■□□□ 1.44
CPNE1-204ENST00000397443 SREBF2Q12772 1141 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 RMDN3Q96TC7 470 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 EFCC1Q9HA90 598 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 FBXO40Q9UH90 709 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 CPA4Q9UI42 421 aa24.06■■□□□ 1.44
CPNE1-204ENST00000397443 FBXO2Q9UK22 296 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-204ENST00000397443 VWA3AA6NCI4 1184 aa24.05■■□□□ 1.44
CPNE1-204ENST00000397443 SLC25A27O95847 323 aa24.05■■□□□ 1.44
CPNE1-204ENST00000397443 GCLCP48506 637 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-204ENST00000397443 USP11P51784 963 aa24.05■■□□□ 1.44
CPNE1-204ENST00000397443 GHRHRQ02643 423 aa24.05■■□□□ 1.44
CPNE1-204ENST00000397443 C4orf32Q8N8J7 132 aa24.05■■□□□ 1.44
CPNE1-204ENST00000397443 CRYGNQ8WXF5 182 aa24.05■■□□□ 1.44
CPNE1-204ENST00000397443 INHBEP58166 350 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 PRR16Q569H4 304 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 AXDND1Q5T1B0 1012 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-204ENST00000397443 ARHGEF16Q5VV41 709 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 TEX2Q8IWB9 1127 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 CCAR1Q8IX12 1150 aaKnown RBP24.04■■□□□ 1.44
CPNE1-204ENST00000397443 IL31RAQ8NI17 732 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 CYP2W1Q8TAV3 490 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 CAPNS2Q96L46 248 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 MAP3K20Q9NYL2 800 aaKnown RBP24.04■■□□□ 1.44
CPNE1-204ENST00000397443 PCNTO95613 3336 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 FAM86B1E9PN63 330 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 FAM86B2P0C5J1 330 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 CALCRLQ16602 461 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 ADALQ6DHV7 355 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 PPP4R3AQ6IN85 833 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 GJA10Q969M2 543 aa24.04■■□□□ 1.44
CPNE1-204ENST00000397443 LIG1P18858 919 aa24.03■■□□□ 1.44
CPNE1-204ENST00000397443 PTPREP23469 700 aa24.03■■□□□ 1.44
CPNE1-204ENST00000397443 CNTN2Q02246 1040 aa24.03■■□□□ 1.44
CPNE1-204ENST00000397443 FSIP1Q8NA03 581 aa24.03■■□□□ 1.44
CPNE1-204ENST00000397443 CSRNP2Q9H175 543 aa24.03■■□□□ 1.44
CPNE1-204ENST00000397443 GOLPH3LQ9H4A5 285 aa24.03■■□□□ 1.44
CPNE1-204ENST00000397443 SRPRBQ9Y5M8 271 aaKnown RBP24.03■■□□□ 1.44
CPNE1-204ENST00000397443 RASSF10A6NK89 507 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 OR52Z1P0C646 297 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 MYCLP12524 364 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-204ENST00000397443 IL17AQ16552 155 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 SAMD3Q8N6K7 520 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 A0A1B0GVL5 298 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 MARCH6O60337 910 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 CUTAO60888 179 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 PGK2P07205 417 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 GCFC2P16383 781 aaKnown RBP24.02■■□□□ 1.44
CPNE1-204ENST00000397443 CCNA1P78396 465 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 PXMP2Q9NR77 195 aa24.02■■□□□ 1.44
CPNE1-204ENST00000397443 MBD3O95983 291 aa24.01■■□□□ 1.43
CPNE1-204ENST00000397443 TXKP42681 527 aa24.01■■□□□ 1.43
CPNE1-204ENST00000397443 NOGQ13253 232 aa24.01■■□□□ 1.43
CPNE1-204ENST00000397443 SKOR2Q2VWA4 1001 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-204ENST00000397443 SHC4Q6S5L8 630 aa24.01■■□□□ 1.43
CPNE1-204ENST00000397443 MMP19Q99542 508 aa24.01■■□□□ 1.43
CPNE1-204ENST00000397443 MORF4L1Q9UBU8 362 aa24.01■■□□□ 1.43
CPNE1-204ENST00000397443 PFASO15067 1338 aa24.01■■□□□ 1.43
CPNE1-204ENST00000397443 RPTORQ8N122 1335 aa24.01■■□□□ 1.43
CPNE1-204ENST00000397443 CYP3A4P08684 503 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 COPB2P35606 906 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 KCTD2Q14681 263 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 PGM5Q15124 567 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 KLHL40Q2TBA0 621 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 CAVIN1Q6NZI2 390 aaKnown RBP24■■□□□ 1.43
CPNE1-204ENST00000397443 DTHD1Q6ZMT9 781 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 MRPS27Q92552 414 aaKnown RBP24■■□□□ 1.43
CPNE1-204ENST00000397443 FERMT2Q96AC1 680 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 NAP1L4Q99733 375 aaKnown RBP24■■□□□ 1.43
CPNE1-204ENST00000397443 GZF1Q9H116 711 aaPredicted RBP24■■□□□ 1.43
CPNE1-204ENST00000397443 MROH8Q9H579 483 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 POTEB2H3BUK9 544 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 FAM110CQ1W6H9 321 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 PDCD2LQ9BRP1 358 aa24■■□□□ 1.43
CPNE1-204ENST00000397443 CYP3A7-CYP3A51PA0A087WV96 503 aa23.99■■□□□ 1.43
CPNE1-204ENST00000397443 FCER1AP12319 257 aa23.99■■□□□ 1.43
CPNE1-204ENST00000397443 CYP3A7P24462 503 aa23.99■■□□□ 1.43
CPNE1-204ENST00000397443 TM4SF4P48230 202 aa23.99■■□□□ 1.43
CPNE1-204ENST00000397443 CRHR2Q13324 411 aa23.99■■□□□ 1.43
CPNE1-204ENST00000397443 ORC2Q13416 577 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-204ENST00000397443 ARL6IP4Q66PJ3 421 aaKnown RBP23.99■■□□□ 1.43
CPNE1-204ENST00000397443 USP49Q70CQ1 688 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms