RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SYDE1Q6ZW31 735 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 DDX46Q7L014 1031 aaKnown RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 GET4Q7L5D6 327 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 LRRTM3Q86VH5 581 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 ANKLE2Q86XL3 938 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 SUGP1Q8IWZ8 645 aaKnown RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 FAM178BQ8IXR5 827 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 MFSD2AQ8NA29 543 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 PPHLN1Q8NEY8 458 aaKnown RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 USP33Q8TEY7 942 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 ERP27Q96DN0 273 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 TRMT2BQ96GJ1 504 aaKnown RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 KIF2CQ99661 725 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 ELAC2Q9BQ52 826 aaKnown RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 FBRSQ9HAH7 460 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 C9orf78Q9NZ63 289 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 KCNG1Q9UIX4 513 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 TRHDEQ9UKU6 1024 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 ASAP1Q9ULH1 1129 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 IPPQ9Y573 584 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 APAF1O14727 1248 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 GABRDO14764 452 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 GPR39O43194 453 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 SLITRK5O94991 958 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 CBX7O95931 251 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 RAC2P15153 192 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 TFE3P19532 575 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-204ENST00000396464 CYP7A1P22680 504 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 RRM1P23921 792 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 STAT4Q14765 748 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 LONRF1Q17RB8 773 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 FYB2Q5VWT5 728 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 RNF219Q5W0B1 726 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-204ENST00000396464 CC2D1AQ6P1N0 951 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-204ENST00000396464 LRFN4Q6PJG9 635 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 SPOCD1Q6ZMY3 1216 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 TOGARAM2Q6ZUX3 1019 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 CREBRFQ8IUR6 639 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 TPH2Q8IWU9 490 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 ZBTB38Q8NAP3 1195 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-204ENST00000396464 LEO1Q8WVC0 666 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-204ENST00000396464 ATXN2LQ8WWM7 1075 aaKnown RBP6.09□□□□□ -1.43
GABPB1-204ENST00000396464 SCLT1Q96NL6 688 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 GPR101Q96P66 508 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-204ENST00000396464 PLCB1Q9NQ66 1216 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 CLIC5Q9NZA1 410 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 HDAC9Q9UKV0 1011 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 RABGAP1Q9Y3P9 1069 aa6.09□□□□□ -1.43
GABPB1-204ENST00000396464 ANO9A1A5B4 782 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 FAM83GA6ND36 823 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 NFIBO00712 420 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 ZRANB2O95218 330 aaKnown RBP eCLIP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 F13A1P00488 732 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 GDNFP39905 211 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 TERF1P54274 439 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 GPSM2P81274 684 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 CNGB1Q14028 1251 aaPredicted RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 INPP5AQ14642 412 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 FOXB2Q5VYV0 432 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 BNC2Q6ZN30 1099 aaPredicted RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 PRR23BQ6ZRT6 265 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 ZNF354CQ86Y25 554 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 HID1Q8IV36 788 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 SKA1Q96BD8 255 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 PLPPR2Q96GM1 343 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 MPP4Q96JB8 637 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 WNT10AQ9GZT5 417 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 LUC7LQ9NQ29 371 aaKnown RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 IP6K2Q9UHH9 426 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 POLG2Q9UHN1 485 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 FBXO2Q9UK22 296 aaPredicted RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 CTDP1Q9Y5B0 961 aaPredicted RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 MORC2Q9Y6X9 1032 aaPredicted RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 ROBO2Q9HCK4 1378 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 TNKSO95271 1327 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 UPK3BL1B0FP48 263 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 UPK3BL2E5RIL1 263 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 PLD2O14939 933 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 TSPAN15O95858 294 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 SDSP20132 328 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 L1CAMP32004 1257 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 CCNFP41002 786 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 ZNF165P49910 485 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 TOMM20Q15388 145 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 FNDC3BQ53EP0 1204 aaKnown RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 COBLL1Q53SF7 1204 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 ZC3H12BQ5HYM0 836 aaKnown RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 WIPI1Q5MNZ9 446 aaPredicted RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 HYIQ5T013 277 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 LETMD1Q6P1Q0 360 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 AGMOQ6ZNB7 445 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 GK5Q6ZS86 529 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 SPATS2Q86XZ4 545 aaKnown RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 IFNL2Q8IZJ0 200 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 TTC30BQ8N4P2 665 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 RBBP8NLQ8NC74 664 aaPredicted RBP6.08□□□□□ -1.44
GABPB1-204ENST00000396464 GJA10Q969M2 543 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 EXOC2Q96KP1 924 aa6.08□□□□□ -1.44
GABPB1-204ENST00000396464 DIRC2Q96SL1 478 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms