RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ATP2A2P16615 1042 aaKnown RBP6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 TPP2P29144 1249 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 RAB27AP51159 221 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 PCBP3P57721 371 aaKnown RBP6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 CYP27A1Q02318 531 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 ITKQ08881 620 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 PRR23CQ6ZRP0 262 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 OVCH1Q7RTY7 1134 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 CNTD1Q8N815 330 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 TP53INP1Q96A56 240 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 ALG1Q9BT22 464 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 IPPKQ9H8X2 491 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 GABBR1Q9UBS5 961 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 TCEAL9Q9UHQ7 104 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 PCDHA2Q9Y5H9 948 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 PCDHA11Q9Y5I1 949 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 AKAP10O43572 662 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 PRKD3O94806 890 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 FKBP9O95302 570 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 SCGB1D2O95969 90 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 SOD2P04179 222 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 CEACAM5P06731 702 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 PAMP19021 973 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 KIZQ2M2Z5 673 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 IQCEQ6IPM2 695 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 FKBP9P1Q75LS8 142 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 NLRP10Q86W26 655 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 CPNE8Q86YQ8 564 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 CHST14Q8NCH0 376 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 TMEM52Q8NDY8 209 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 DPF3Q92784 378 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 UBE2FQ969M7 185 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 DCAF5Q96JK2 942 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 YIPF4Q9BSR8 244 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 MKNK2Q9HBH9 465 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 VTA1Q9NP79 307 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 ZSWIM5Q9P217 1185 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 B4GALT6Q9UBX8 382 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 ZNF281Q9Y2X9 895 aa6.79□□□□□ -1.32
HMGB1P10-201ENST00000395823 CCDC66A2RUB6 948 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 MAP4K4O95819 1239 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 CLCN7P51798 805 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 TBX4P57082 545 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 IL2P60568 153 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 TEKQ02763 1124 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 NFIAQ12857 509 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 SYDE2Q5VT97 1194 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 RNF111Q6ZNA4 994 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 THAP5Q7Z6K1 395 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 CBARPQ8N350 705 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 CISD2Q8N5K1 135 aaKnown RBP6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 CHTF18Q8WVB6 975 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 C8orf48Q96LL4 319 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 GPR101Q96P66 508 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 CDADC1Q9BWV3 514 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 RTFDC1Q9BY42 306 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 EMC7Q9NPA0 242 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 SPTLC3Q9NUV7 552 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 THG1LQ9NWX6 298 aaKnown RBP6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 H2AFY2Q9P0M6 372 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 DUSP13Q9UII6 198 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 CBLCQ9ULV8 474 aa6.78□□□□□ -1.32
HMGB1P10-201ENST00000395823 TNKSO95271 1327 aa6.77□□□□□ -1.32
HMGB1P10-201ENST00000395823 PITPNM2Q9BZ72 1349 aa6.77□□□□□ -1.32
HMGB1P10-201ENST00000395823 CCDC194A0A1B0GVG4 234 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 C7orf72A4D263 438 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 ESR1P03372 595 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 PYGMP11217 842 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 GRK2P25098 689 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 GRK3P35626 688 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 LSSP48449 732 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 DNM2P50570 870 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 LAPTM5Q13571 262 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 PPP2R5AQ15172 486 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 DUSP27Q5VZP5 1158 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 PLD6Q8N2A8 252 aaKnown RBP6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 SHKBP1Q8TBC3 707 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 FBXW5Q969U6 566 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 HOOK2Q96ED9 719 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 DBNDD2Q9BQY9 259 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 ATP13A1Q9HD20 1204 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 ERVK13-1Q9NX77 482 aa6.77□□□□□ -1.33
HMGB1P10-201ENST00000395823 TRBV23OR9-2A0A075B6M9 112 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 PTPDC1A2A3K4 754 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 K7ESF4 209 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 LTKP29376 864 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 BCL6P41182 706 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 ERVK-21P61565 698 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 PIN1Q13526 163 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 INAVAQ3KP66 663 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 ATP13A4Q4VNC1 1196 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 FSTL4Q6MZW2 842 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 C16orf59Q7L2K0 433 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 CHMP4CQ96CF2 233 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 LRRC4CQ9HCJ2 640 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 CABP5Q9NP86 173 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 TPSG1Q9NRR2 321 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 ZIM2Q9NZV7 527 aa6.76□□□□□ -1.33
HMGB1P10-201ENST00000395823 FAM47E-STBD1D6RA91 191 aa6.75□□□□□ -1.33
HMGB1P10-201ENST00000395823 ZNF561-AS1K7EIQ3 104 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms