RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 NAPAP54920 295 aa21.28■■□□□ 1
CCDC50-202ENST00000392456 SNW1Q13573 536 aaKnown RBP21.28■■□□□ 1
CCDC50-202ENST00000392456 ZYXQ15942 572 aaKnown RBP21.28■■□□□ 1
CCDC50-202ENST00000392456 ADALQ6DHV7 355 aa21.28■■□□□ 1
CCDC50-202ENST00000392456 CC2D1AQ6P1N0 951 aaPredicted RBP21.28■■□□□ 1
CCDC50-202ENST00000392456 ETAA1Q9NY74 926 aa21.28■■□□□ 1
CCDC50-202ENST00000392456 H3BQF6 201 aa21.28■■□□□ 1
CCDC50-202ENST00000392456 GMCL1P1Q8NEA9 526 aa21.28■■□□□ 1
CCDC50-202ENST00000392456 UBXN4Q92575 508 aa21.28■■□□□ 1
CCDC50-202ENST00000392456 PCDHA6Q9UN73 950 aa21.28■■□□□ 1
CCDC50-202ENST00000392456 PCDHA8Q9Y5H6 950 aa21.28■■□□□ 1
CCDC50-202ENST00000392456 PAX7P23759 505 aa21.27■■□□□ 1
CCDC50-202ENST00000392456 FSIP1Q8NA03 581 aa21.27■■□□□ 1
CCDC50-202ENST00000392456 ZMYND12Q9H0C1 365 aa21.27■■□□□ 1
CCDC50-202ENST00000392456 SMCO2A6NFE2 343 aa21.27■□□□□ 0.99
CCDC50-202ENST00000392456 ADCY2Q08462 1091 aa21.27■□□□□ 0.99
CCDC50-202ENST00000392456 TBC1D8BQ0IIM8 1120 aa21.27■□□□□ 0.99
CCDC50-202ENST00000392456 GBP6Q6ZN66 633 aa21.27■□□□□ 0.99
CCDC50-202ENST00000392456 FMNL3Q8IVF7 1028 aa21.27■□□□□ 0.99
CCDC50-202ENST00000392456 ENGASEQ8NFI3 743 aa21.27■□□□□ 0.99
CCDC50-202ENST00000392456 DCAF4Q8WV16 495 aa21.27■□□□□ 0.99
CCDC50-202ENST00000392456 TRIM5Q9C035 493 aa21.27■□□□□ 0.99
CCDC50-202ENST00000392456 TMX2Q9Y320 296 aa21.27■□□□□ 0.99
CCDC50-202ENST00000392456 INPP5BP32019 993 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 ZNF174Q15697 407 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 SPECC1Q5M775 1068 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 LUZP1Q86V48 1076 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 ZNF526Q8TF50 670 aaPredicted RBP21.26■□□□□ 0.99
CCDC50-202ENST00000392456 NUCKS1Q9H1E3 243 aaKnown RBP21.26■□□□□ 0.99
CCDC50-202ENST00000392456 TMEM232C9JQI7 657 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 TAL1P17542 331 aaPredicted RBP21.26■□□□□ 0.99
CCDC50-202ENST00000392456 CALML3P27482 149 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 NDUFA8P51970 172 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 MTMR8Q96EF0 704 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 GMCL1Q96IK5 515 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 PRDM16Q9HAZ2 1276 aa21.26■□□□□ 0.99
CCDC50-202ENST00000392456 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.26■□□□□ 0.99
CCDC50-202ENST00000392456 TRMT1Q9NXH9 659 aaKnown RBP21.26■□□□□ 0.99
CCDC50-202ENST00000392456 PNMA6FA0A0J9YX94 578 aa21.25■□□□□ 0.99
CCDC50-202ENST00000392456 CDC25BP30305 580 aa21.25■□□□□ 0.99
CCDC50-202ENST00000392456 DGKZQ13574 1117 aa21.25■□□□□ 0.99
CCDC50-202ENST00000392456 SHC4Q6S5L8 630 aa21.25■□□□□ 0.99
CCDC50-202ENST00000392456 POLR2AP24928 1970 aaKnown RBP21.25■□□□□ 0.99
CCDC50-202ENST00000392456 ERLIN2O94905 339 aa21.24■□□□□ 0.99
CCDC50-202ENST00000392456 PPP6R2O75170 966 aa21.24■□□□□ 0.99
CCDC50-202ENST00000392456 BMP3P12645 472 aa21.24■□□□□ 0.99
CCDC50-202ENST00000392456 LRRC31Q6UY01 552 aa21.24■□□□□ 0.99
CCDC50-202ENST00000392456 CKAP2LQ8IYA6 745 aa21.24■□□□□ 0.99
CCDC50-202ENST00000392456 CCDC148Q8NFR7 591 aa21.24■□□□□ 0.99
CCDC50-202ENST00000392456 FUT8Q9BYC5 575 aa21.24■□□□□ 0.99
CCDC50-202ENST00000392456 ARHGEF10LQ9HCE6 1279 aa21.24■□□□□ 0.99
CCDC50-202ENST00000392456 A0A1W2PQ27 194 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 A0A1W2PQ64 194 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 A0A1W2PQD8 194 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 TRIM75PA6NK02 468 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 ZBTB5O15062 677 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 SKILP12757 684 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 NEDD9Q14511 834 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 QRICH1Q2TAL8 776 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 MRPS27Q92552 414 aaKnown RBP21.23■□□□□ 0.99
CCDC50-202ENST00000392456 MCM8Q9UJA3 840 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 COQ9O75208 318 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 ASNSP08243 561 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 GCFC2P16383 781 aaKnown RBP21.23■□□□□ 0.99
CCDC50-202ENST00000392456 GPR162Q16538 588 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 MAP3K11Q16584 847 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 FAM83BQ5T0W9 1011 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 FMR1NBQ8N0W7 255 aaPredicted RBP21.23■□□□□ 0.99
CCDC50-202ENST00000392456 DAGLBQ8NCG7 672 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 ZKSCAN4Q969J2 545 aaPredicted RBP21.23■□□□□ 0.99
CCDC50-202ENST00000392456 NUP62CLQ9H1M0 184 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 TMEM260Q9NX78 707 aa21.23■□□□□ 0.99
CCDC50-202ENST00000392456 BIN2Q9UBW5 565 aaPredicted RBP21.23■□□□□ 0.99
CCDC50-202ENST00000392456 TYRO3Q06418 890 aa21.22■□□□□ 0.99
CCDC50-202ENST00000392456 GRIK3Q13003 919 aa21.22■□□□□ 0.99
CCDC50-202ENST00000392456 TTC38Q5R3I4 469 aa21.22■□□□□ 0.99
CCDC50-202ENST00000392456 FBXO2Q9UK22 296 aaPredicted RBP21.22■□□□□ 0.99
CCDC50-202ENST00000392456 FAM160A1Q05DH4 1040 aa21.22■□□□□ 0.99
CCDC50-202ENST00000392456 IKQ13123 557 aaPredicted RBP21.22■□□□□ 0.99
CCDC50-202ENST00000392456 INF2Q27J81 1249 aa21.22■□□□□ 0.99
CCDC50-202ENST00000392456 CAND2O75155 1236 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 TADA3O75528 432 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 CCZ1BP86790 482 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 CCZ1P86791 482 aaPredicted RBP21.21■□□□□ 0.99
CCDC50-202ENST00000392456 MTA1Q13330 715 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 ARID5BQ14865 1188 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 CDC37Q16543 378 aaPredicted RBP21.21■□□□□ 0.99
CCDC50-202ENST00000392456 AP1ARQ63HQ0 302 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 APOBEC3FQ8IUX4 373 aaKnown RBP21.21■□□□□ 0.99
CCDC50-202ENST00000392456 ERCC4Q92889 916 aaPredicted RBP21.21■□□□□ 0.99
CCDC50-202ENST00000392456 PAIP2Q9BPZ3 127 aaKnown RBP21.21■□□□□ 0.99
CCDC50-202ENST00000392456 ZNF341Q9BYN7 854 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 FAM107BQ9H098 131 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 CLSTN2Q9H4D0 955 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 CMA1P23946 247 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 MCM7P33993 719 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 PRKG1Q13976 671 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 CCDC73Q6ZRK6 1079 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 USP49Q70CQ1 688 aa21.21■□□□□ 0.99
CCDC50-202ENST00000392456 CBX8Q9HC52 389 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms