RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 NPHS1O60500 1241 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 USP2O75604 605 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 APPP05067 770 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 JMJD7P0C870 316 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 KCNA6P17658 529 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 FUT4P22083 530 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 SSTR4P31391 388 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 FLT3P36888 993 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 BCL6P41182 706 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 KIR2DL1P43626 348 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 KIR2DL2P43627 348 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 GTF2A2P52657 109 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 RPL11P62913 178 aaKnown RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 RBM10P98175 930 aaKnown RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 PAK1Q13153 545 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 CT47A1Q5JQC4 288 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 ZCCHC8Q6NZY4 707 aaKnown RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 PKN3Q6P5Z2 889 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 ABHD17CQ6PCB6 329 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 NLRP10Q86W26 655 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 ZC3H7AQ8IWR0 971 aaKnown RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 RPUSD2Q8IZ73 545 aaKnown RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 AHI1Q8N157 1196 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 Q8N1Y9 231 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 AFAP1L2Q8N4X5 818 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 UBR7Q8N806 425 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 FLCNQ8NFG4 579 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 PCDH19Q8TAB3 1148 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 DPF3Q92784 378 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 JMJD8Q96S16 334 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 FAM126AQ9BYI3 521 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 CDIP1Q9H305 208 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 PAK6Q9NQU5 681 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 PPARGC1AQ9UBK2 798 aaKnown RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 TMEM59LQ9UK28 342 aa4.41□□□□□ -1.7
PTPRC-205ENST00000391970 TIMM13Q9Y5L4 95 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-205ENST00000391970 KPNA6O60684 536 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 NPTXRO95502 500 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 SOD2P04179 222 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 CKMP06732 381 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 GRK2P25098 689 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 GRK3P35626 688 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 NEK4P51957 841 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 CORO7P57737 925 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 LSAMPQ13449 338 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 PCBP1Q15365 356 aaKnown RBP eCLIP4.4□□□□□ -1.71
PTPRC-205ENST00000391970 SEPT7Q16181 437 aaKnown RBP4.4□□□□□ -1.71
PTPRC-205ENST00000391970 HSF5Q4G112 596 aaPredicted RBP4.4□□□□□ -1.71
PTPRC-205ENST00000391970 CDCA2Q69YH5 1023 aaPredicted RBP4.4□□□□□ -1.71
PTPRC-205ENST00000391970 UBE2R2Q712K3 238 aaPredicted RBP4.4□□□□□ -1.71
PTPRC-205ENST00000391970 ANKLE2Q86XL3 938 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 JAMLQ86YT9 394 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 ANKS4BQ8N8V4 417 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 ORAI3Q9BRQ5 295 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 CELF4Q9BZC1 486 aaKnown RBP4.4□□□□□ -1.71
PTPRC-205ENST00000391970 MTFR1LQ9H019 292 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 IPPKQ9H8X2 491 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 PRDM7Q9NQW5 492 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 ANGEL1Q9UNK9 670 aaKnown RBP4.4□□□□□ -1.71
PTPRC-205ENST00000391970 ATP8A1Q9Y2Q0 1164 aa4.4□□□□□ -1.71
PTPRC-205ENST00000391970 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 FAM47E-STBD1D6RA91 191 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 H7BY64 318 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 PPP1R11O60927 126 aaPredicted RBP4.39□□□□□ -1.71
PTPRC-205ENST00000391970 GLRX3O76003 335 aaKnown RBP4.39□□□□□ -1.71
PTPRC-205ENST00000391970 RTP1P59025 263 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 CHRNEQ04844 493 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 CFAP100Q494V2 611 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 PIK3R6Q5UE93 754 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 SLC23A3Q6PIS1 610 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 CEP128Q6ZU80 1094 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 DDX53Q86TM3 631 aaKnown RBP4.39□□□□□ -1.71
PTPRC-205ENST00000391970 IGSF22Q8N9C0 903 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 PDZD8Q8NEN9 1154 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 NLGN2Q8NFZ4 835 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 LEO1Q8WVC0 666 aaPredicted RBP4.39□□□□□ -1.71
PTPRC-205ENST00000391970 CCDC120Q96HB5 630 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 CHAMP1Q96JM3 812 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 CLDND1Q9NY35 253 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 SAMD15Q9P1V8 674 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 GULP1Q9UBP9 304 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 ADGRE2Q9UHX3 823 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 COQ6Q9Y2Z9 468 aa4.39□□□□□ -1.71
PTPRC-205ENST00000391970 WTIPA6NIX2 430 aaPredicted RBP4.38□□□□□ -1.71
PTPRC-205ENST00000391970 NOTOA8MTQ0 251 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 CBX4O00257 560 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 NRDCO43847 1150 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 SRGAP2CP0DJJ0 459 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 FPR2P25090 351 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 CDKN1CP49918 316 aaPredicted RBP4.38□□□□□ -1.71
PTPRC-205ENST00000391970 HK2P52789 917 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 NFKB2Q00653 900 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 DHCR24Q15392 516 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 FAM47CQ5HY64 1035 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 CEP68Q76N32 757 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 DDX46Q7L014 1031 aaKnown RBP4.38□□□□□ -1.71
PTPRC-205ENST00000391970 STRA8Q7Z7C7 330 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 DDX42Q86XP3 938 aaKnown RBP eCLIP4.38□□□□□ -1.71
PTPRC-205ENST00000391970 KIF18BQ86Y91 864 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms