RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ADGRG2Q8IZP9 1017 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 CRACR2BQ8N4Y2 399 aaPredicted RBP5.58□□□□□ -1.52
TRAV40-201ENST00000390467 PLEKHO2Q8TD55 490 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 ALG3Q92685 438 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 TSPAN17Q96FV3 270 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 MMP19Q99542 508 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.58□□□□□ -1.52
TRAV40-201ENST00000390467 RNF38Q9H0F5 515 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 TRBV23OR9-2A0A075B6M9 112 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 A0A1B0GTL3 188 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 OTOL1A6NHN0 477 aaPredicted RBP5.57□□□□□ -1.52
TRAV40-201ENST00000390467 NOP56O00567 594 aaKnown RBP5.57□□□□□ -1.52
TRAV40-201ENST00000390467 NTRK1P04629 796 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 HTRA3P83110 453 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 FOXO4P98177 505 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 TARBP2Q15633 366 aaKnown RBP5.57□□□□□ -1.52
TRAV40-201ENST00000390467 SF1Q15637 639 aaKnown RBP5.57□□□□□ -1.52
TRAV40-201ENST00000390467 TEX2Q8IWB9 1127 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 LINC01356Q8N9X3 169 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 FNIP1Q8TF40 1166 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 CYP26B1Q9NR63 512 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.57□□□□□ -1.52
TRAV40-201ENST00000390467 MARCH2Q9P0N8 246 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 TMEFF2Q9UIK5 374 aaPredicted RBP5.57□□□□□ -1.52
TRAV40-201ENST00000390467 FBXL7Q9UJT9 491 aa5.57□□□□□ -1.52
TRAV40-201ENST00000390467 NCANO14594 1321 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 DDAH1O94760 285 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 GJB6O95452 261 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 DLX2Q07687 328 aaPredicted RBP5.56□□□□□ -1.52
TRAV40-201ENST00000390467 PRSS53Q2L4Q9 553 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 SV2CQ496J9 727 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 NLRP10Q86W26 655 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 VPS37DQ86XT2 251 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 USP33Q8TEY7 942 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 HNRNPLLQ8WVV9 542 aaKnown RBP5.56□□□□□ -1.52
TRAV40-201ENST00000390467 PEX11GQ96HA9 241 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 BTG4Q9NY30 223 aa5.56□□□□□ -1.52
TRAV40-201ENST00000390467 NCAM1P13591 858 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 FPR2P25090 351 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 RBM25P49756 843 aaKnown RBP5.55□□□□□ -1.52
TRAV40-201ENST00000390467 CAP1Q01518 475 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 DENND5AQ6IQ26 1287 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 B3GNT8Q7Z7M8 397 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 SP8Q8IXZ3 490 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 CELF2-AS1Q8N7Q2 184 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 KREMEN2Q8NCW0 462 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 NOX5Q96PH1 765 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 SYT3Q9BQG1 590 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 LUC7LQ9NQ29 371 aaKnown RBP5.55□□□□□ -1.52
TRAV40-201ENST00000390467 RTEL1Q9NZ71 1219 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 FAN1Q9Y2M0 1017 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 PMF1-BGLAPU3KQ54 211 aa5.55□□□□□ -1.52
TRAV40-201ENST00000390467 B8ZZF3 427 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 PRRG2O14669 202 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 SASH1O94885 1247 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 SCG5P05408 212 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 SNRPB2P08579 225 aaKnown RBP5.54□□□□□ -1.52
TRAV40-201ENST00000390467 DNAJA1P31689 397 aaKnown RBP5.54□□□□□ -1.52
TRAV40-201ENST00000390467 BUD31P41223 144 aaPredicted RBP5.54□□□□□ -1.52
TRAV40-201ENST00000390467 ECI1P42126 302 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 ARID5AQ03989 594 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 GNL2Q13823 731 aaKnown RBP5.54□□□□□ -1.52
TRAV40-201ENST00000390467 FXNQ16595 210 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 SLC10A6Q3KNW5 377 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 SAPCD2Q86UD0 394 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 ZDHHC14Q8IZN3 488 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 SMARCC2Q8TAQ2 1214 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 ZNF526Q8TF50 670 aaPredicted RBP5.54□□□□□ -1.52
TRAV40-201ENST00000390467 C1orf159Q96HA4 380 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 ADAM7Q9H2U9 754 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 IGSF5Q9NSI5 407 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 NUDT5Q9UKK9 219 aa5.54□□□□□ -1.52
TRAV40-201ENST00000390467 C22orf46C9J442 243 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 SGSM2O43147 1006 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 CAPNS1P04632 268 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 C8BP07358 591 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 LCP1P13796 627 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 GRIA2P42262 883 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 SLURP1P55000 103 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 GFRA1P56159 465 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 CACNB2Q08289 660 aaPredicted RBP5.53□□□□□ -1.52
TRAV40-201ENST00000390467 NFIXQ14938 502 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 SLC9A5Q14940 896 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 LIPIQ6XZB0 460 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 Q8N1Y9 231 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 TMEM145Q8NBT3 493 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 LRP2BPQ9P2M1 347 aa5.53□□□□□ -1.52
TRAV40-201ENST00000390467 MEFVO15553 781 aaPredicted RBP5.52□□□□□ -1.53
TRAV40-201ENST00000390467 RPL11P62913 178 aaKnown RBP5.52□□□□□ -1.53
TRAV40-201ENST00000390467 E4F1Q66K89 784 aaPredicted RBP5.52□□□□□ -1.53
TRAV40-201ENST00000390467 DCP2Q8IU60 420 aaKnown RBP5.52□□□□□ -1.53
TRAV40-201ENST00000390467 PPIL6Q8IXY8 311 aa5.52□□□□□ -1.53
TRAV40-201ENST00000390467 NLGN1Q8N2Q7 840 aa5.52□□□□□ -1.53
TRAV40-201ENST00000390467 CPA5Q8WXQ8 436 aa5.52□□□□□ -1.53
TRAV40-201ENST00000390467 DIO2Q92813 273 aa5.52□□□□□ -1.53
TRAV40-201ENST00000390467 RELTQ969Z4 430 aa5.52□□□□□ -1.53
TRAV40-201ENST00000390467 SPATA25Q9BR10 227 aa5.52□□□□□ -1.53
TRAV40-201ENST00000390467 ST7Q9NRC1 585 aa5.52□□□□□ -1.53
TRAV40-201ENST00000390467 SH3D21A4FU49 640 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 FOXD2O60548 495 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms