RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 FAM114A1Q8IWE2 563 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 CCDC170Q8IYT3 715 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 CALML4Q96GE6 196 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 LRWD1Q9UFC0 647 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 SIK3Q9Y2K2 1263 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 SAR1BQ9Y6B6 198 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 A0A1W2PQJ5 194 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 CYLC1P35663 651 aaPredicted RBP12.19□□□□□ -0.46
BEST1-201ENST00000378043 PPP1R2P41236 205 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 CDK17Q00537 523 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 SV2BQ7L1I2 683 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 KRT26Q7Z3Y9 468 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 KIAA1328Q86T90 577 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
BEST1-201ENST00000378043 GLIS3Q8NEA6 775 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 DAGLAQ9Y4D2 1042 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 PLIN4Q96Q06 1357 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 KRT86O43790 486 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 ERLIN1O75477 346 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 HNRNPH3P31942 346 aaKnown RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 HNRNPH2P55795 449 aaKnown RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 CASP8Q14790 479 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 TAF3Q5VWG9 929 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 UNC13DQ70J99 1090 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 DYMQ7RTS9 669 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 FNBP4Q8N3X1 1017 aaPredicted RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 LARP4BQ92615 738 aaKnown RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 STK17AQ9UEE5 414 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 LTBP1Q14766 1721 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 UBR3Q6ZT12 1888 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 IGKV6D-41A0A0C4DH26 115 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 PVALEFA0A1B0GWK0 134 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 PDE2AO00408 941 aaPredicted RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 AKR1B1P15121 316 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 USP14P54578 494 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 EIF6P56537 245 aaKnown RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 EHHADHQ08426 723 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 ECM1Q16610 540 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 PCMTD1Q96MG8 357 aaPredicted RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 ZNHIT6Q9NWK9 470 aaKnown RBP12.18□□□□□ -0.46
BEST1-201ENST00000378043 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
BEST1-201ENST00000378043 LRRIQ3A6PVS8 624 aaPredicted RBP12.17□□□□□ -0.46
BEST1-201ENST00000378043 ZNF185O15231 689 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 VWA3BQ502W6 1294 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 NDST4Q9H3R1 872 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
BEST1-201ENST00000378043 MACROD2A1Z1Q3 448 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 hCG_1984214I3L0E3 225 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 GYS1P13807 737 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 ADCY7P51828 1080 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 PICALMQ13492 652 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 PDIA5Q14554 519 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 LRRC55Q6ZSA7 311 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 GUF1Q8N442 669 aaKnown RBP12.17□□□□□ -0.46
BEST1-201ENST00000378043 ZNF713Q8N859 430 aaPredicted RBP12.17□□□□□ -0.46
BEST1-201ENST00000378043 RAD54LQ92698 747 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 GJA10Q969M2 543 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 CAPZA3Q96KX2 299 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 GPCPD1Q9NPB8 672 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 DDX4Q9NQI0 724 aaKnown RBP12.17□□□□□ -0.46
BEST1-201ENST00000378043 FAM207AQ9NSI2 230 aaPredicted RBP12.17□□□□□ -0.46
BEST1-201ENST00000378043 ARFGEF1Q9Y6D6 1849 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 SERPINB2P05120 415 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 TUBBP07437 444 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 VAV2P52735 878 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 FKBP15Q5T1M5 1219 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 EHBP1Q8NDI1 1231 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 SMCR8Q8TEV9 937 aaPredicted RBP12.17□□□□□ -0.46
BEST1-201ENST00000378043 HAS1Q92839 578 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 JMJD4Q9H9V9 463 aa12.17□□□□□ -0.46
BEST1-201ENST00000378043 MYH4Q9Y623 1939 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 ERCC3P19447 782 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 CLK2P49760 499 aaKnown RBP12.16□□□□□ -0.46
BEST1-201ENST00000378043 GTF2IP78347 998 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 UBE2SQ16763 222 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 TMEM119Q4V9L6 283 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 TTBK2Q6IQ55 1244 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 DPP8Q6V1X1 898 aaPredicted RBP12.16□□□□□ -0.46
BEST1-201ENST00000378043 TBC1D22AQ8WUA7 517 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 DDX12PQ92771 950 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 EXOC4Q96A65 974 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 CCDC42Q96M95 316 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 ANO9A1A5B4 782 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 BBOX1O75936 387 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 ZNF543Q08ER8 600 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 LRRC41Q15345 812 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 C2CD5Q86YS7 1000 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 ADGRF4Q8IZF3 695 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 SNX29Q8TEQ0 813 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 DNAJC19Q96DA6 116 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 GBP3Q9H0R5 595 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 PSD3Q9NYI0 1048 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms