RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CCDC194A0A1B0GVG4 234 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 ZPR1O75312 459 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 HEXIM1O94992 359 aaKnown RBP18.3■□□□□ 0.52
TRIM39-201ENST00000376656 CYP19A1P11511 503 aaPredicted RBP18.3■□□□□ 0.52
TRIM39-201ENST00000376656 DNA2P51530 1060 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 RASSF7Q02833 373 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 GFPT1Q06210 699 aaPredicted RBP18.3■□□□□ 0.52
TRIM39-201ENST00000376656 TMC4Q7Z404 712 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 SEMA6BQ9H3T3 888 aa18.3■□□□□ 0.52
TRIM39-201ENST00000376656 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRIM39-201ENST00000376656 DZIP3Q86Y13 1208 aaKnown RBP18.29■□□□□ 0.52
TRIM39-201ENST00000376656 ZNF34Q8IZ26 560 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 FLT1P17948 1338 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 WTIPA6NIX2 430 aaPredicted RBP18.29■□□□□ 0.52
TRIM39-201ENST00000376656 NR1D1P20393 614 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 GYG1P46976 350 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 VWA3BQ502W6 1294 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 ERCC3P19447 782 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 TRADDQ15628 312 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 PTGISQ16647 500 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 KIAA0895Q8NCT3 520 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 ZNF384Q8TF68 577 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 NDST4Q9H3R1 872 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 PCDHA6Q9UN73 950 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 PCDHA8Q9Y5H6 950 aa18.29■□□□□ 0.52
TRIM39-201ENST00000376656 COL22A1Q8NFW1 1626 aaPredicted RBP18.28■□□□□ 0.52
TRIM39-201ENST00000376656 M0R2N6 131 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 PPP1R37O75864 691 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 SLC1A4P43007 532 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 HDLBPQ00341 1268 aaKnown RBP18.28■□□□□ 0.52
TRIM39-201ENST00000376656 CHRNDQ07001 517 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 GLE1Q53GS7 698 aaKnown RBP18.28■□□□□ 0.52
TRIM39-201ENST00000376656 CABP7Q86V35 215 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 SPATS2Q86XZ4 545 aaKnown RBP18.28■□□□□ 0.52
TRIM39-201ENST00000376656 JPH2Q9BR39 696 aaPredicted RBP18.28■□□□□ 0.52
TRIM39-201ENST00000376656 PJA2O43164 708 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 RNF187Q5TA31 235 aaPredicted RBP18.28■□□□□ 0.52
TRIM39-201ENST00000376656 CCDC47Q96A33 483 aaKnown RBP18.28■□□□□ 0.52
TRIM39-201ENST00000376656 SLC39A2Q9NP94 309 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 CACNA1SQ13698 1873 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 COL1A1P02452 1464 aaPredicted RBP18.28■□□□□ 0.52
TRIM39-201ENST00000376656 PAK2Q13177 524 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 TXNRD1Q16881 649 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 STAG2Q8N3U4 1231 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 CCT8L2Q96SF2 557 aa18.28■□□□□ 0.52
TRIM39-201ENST00000376656 MYH1P12882 1939 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 COL5A2P05997 1499 aaPredicted RBP18.27■□□□□ 0.52
TRIM39-201ENST00000376656 CYP2D6P10635 497 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 PPARDQ03181 441 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 SEMA3FQ13275 785 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 NLRP14Q86W24 1093 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 MYCBPAPQ8TBZ2 947 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 CASKIN2Q8WXE0 1202 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 NOX5Q96PH1 765 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 PAGR1Q9BTK6 254 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 CD248Q9HCU0 757 aa18.27■□□□□ 0.52
TRIM39-201ENST00000376656 IGHMBP2P38935 993 aaKnown RBP18.27■□□□□ 0.51
TRIM39-201ENST00000376656 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.51
TRIM39-201ENST00000376656 BAP1Q92560 729 aa18.27■□□□□ 0.51
TRIM39-201ENST00000376656 CARD10Q9BWT7 1032 aa18.27■□□□□ 0.51
TRIM39-201ENST00000376656 SETQ01105 290 aaPredicted RBP18.26■□□□□ 0.51
TRIM39-201ENST00000376656 ASTE1Q2TB18 679 aaPredicted RBP18.26■□□□□ 0.51
TRIM39-201ENST00000376656 MICALCLQ6ZW33 695 aa18.26■□□□□ 0.51
TRIM39-201ENST00000376656 C7orf25Q9BPX7 421 aa18.26■□□□□ 0.51
TRIM39-201ENST00000376656 ORC4O43929 436 aa18.26■□□□□ 0.51
TRIM39-201ENST00000376656 PCP11498 1178 aaKnown RBP18.26■□□□□ 0.51
TRIM39-201ENST00000376656 MDH1P40925 334 aaKnown RBP18.26■□□□□ 0.51
TRIM39-201ENST00000376656 IQCDQ96DY2 449 aa18.26■□□□□ 0.51
TRIM39-201ENST00000376656 ATP6V1G3Q96LB4 118 aa18.26■□□□□ 0.51
TRIM39-201ENST00000376656 KRT12Q99456 494 aa18.26■□□□□ 0.51
TRIM39-201ENST00000376656 RNASE9P60153 205 aaKnown RBP18.26■□□□□ 0.51
TRIM39-201ENST00000376656 SLC4A8Q2Y0W8 1093 aa18.26■□□□□ 0.51
TRIM39-201ENST00000376656 EMC10Q5UCC4 262 aa18.26■□□□□ 0.51
TRIM39-201ENST00000376656 FTCDO95954 541 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 KIF5BP33176 963 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 DDR1Q08345 913 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 IFT88Q13099 833 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 YTHDF3Q7Z739 585 aaKnown RBP18.25■□□□□ 0.51
TRIM39-201ENST00000376656 CD302Q8IX05 232 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 MREGQ8N565 214 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 CUEDC2Q9H467 287 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 TSPY2A6NKD2 308 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 ERVV-1B6SEH8 477 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 ATP6V1AP38606 617 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 CENPPQ6IPU0 288 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 SH3GLB2Q9NR46 395 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 TCP11L1Q9NUJ3 509 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 A0A1B0GUL6 1792 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 ITGB3BPQ13352 177 aaPredicted RBP18.25■□□□□ 0.51
TRIM39-201ENST00000376656 PDXDC1Q6P996 788 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 VCPKMTQ9H867 229 aa18.25■□□□□ 0.51
TRIM39-201ENST00000376656 PACSIN2Q9UNF0 486 aaPredicted RBP18.25■□□□□ 0.51
TRIM39-201ENST00000376656 KAT6BQ8WYB5 2073 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 E7EVH7 732 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 PALMO75781 387 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 MAN2A1Q16706 1144 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 SLC35G1Q2M3R5 365 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms