RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 SERPINB13Q9UIV8 391 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 LUC7L2Q9Y383 392 aaKnown RBP13.68□□□□□ -0.22
UBR4-203ENST00000375225 DICER1Q9UPY3 1922 aaKnown RBP13.67□□□□□ -0.22
UBR4-203ENST00000375225 PVALEFA0A1B0GWK0 134 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
UBR4-203ENST00000375225 KLRC4O43908 158 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 RPS12P25398 132 aaKnown RBP13.67□□□□□ -0.22
UBR4-203ENST00000375225 KRT9P35527 623 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 CYLC1P35663 651 aaPredicted RBP13.67□□□□□ -0.22
UBR4-203ENST00000375225 KRT83P78385 493 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 GABPAQ06546 454 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 CXCL9Q07325 125 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 PSMD2Q13200 908 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 DLGAP5Q15398 846 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 NAALADL2Q58DX5 795 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 KRT79Q5XKE5 535 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 CSGALNACT2Q8N6G5 542 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 RABGGTAQ92696 567 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 CUL5Q93034 780 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 GMLQ99445 158 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 DHX36Q9H2U1 1008 aaKnown RBP13.67□□□□□ -0.22
UBR4-203ENST00000375225 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 DDX4Q9NQI0 724 aaKnown RBP13.67□□□□□ -0.22
UBR4-203ENST00000375225 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBR4-203ENST00000375225 STK24Q9Y6E0 443 aa13.67□□□□□ -0.22
UBR4-203ENST00000375225 V9GYY5 206 aaPredicted RBP13.67□□□□□ -0.22
UBR4-203ENST00000375225 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 MARCH6O60337 910 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 SNHG28P0DPA3 235 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 RASSF7Q02833 373 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 NAA30Q147X3 362 aaPredicted RBP13.66□□□□□ -0.22
UBR4-203ENST00000375225 FOXR2Q6PJQ5 311 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 TXLNBQ8N3L3 684 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 KIFC2Q96AC6 838 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 TSG101Q99816 390 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 TRIM34Q9BYJ4 488 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 EHD4Q9H223 541 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 RIC8AQ9NPQ8 531 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 LRWD1Q9UFC0 647 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 ABCB11O95342 1321 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 KDM3AQ9Y4C1 1321 aa13.66□□□□□ -0.22
UBR4-203ENST00000375225 COL2A1P02458 1487 aaPredicted RBP13.66□□□□□ -0.22
UBR4-203ENST00000375225 IGKV6D-41A0A0C4DH26 115 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 KIF20AO95235 890 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
UBR4-203ENST00000375225 TECP42680 631 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 MTIF2P46199 727 aaKnown RBP13.65□□□□□ -0.22
UBR4-203ENST00000375225 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 SLC35G1Q2M3R5 365 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 KIF4BQ2VIQ3 1234 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 PPP4R3AQ6IN85 833 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 TTI2Q6NXR4 508 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 RAD9BQ6WBX8 426 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 UNC13DQ70J99 1090 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 ILDR2Q71H61 639 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 NAPGQ99747 312 aaPredicted RBP13.65□□□□□ -0.22
UBR4-203ENST00000375225 DESI2Q9BSY9 194 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 HAUS4Q9H6D7 363 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 LZTFL1Q9NQ48 299 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
UBR4-203ENST00000375225 BIN2Q9UBW5 565 aaPredicted RBP13.65□□□□□ -0.22
UBR4-203ENST00000375225 CAPN11Q9UMQ6 739 aa13.65□□□□□ -0.22
UBR4-203ENST00000375225 ZBTB12Q9Y330 459 aaPredicted RBP13.65□□□□□ -0.22
UBR4-203ENST00000375225 ENTPD3O75355 529 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 CDC25AP30304 524 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 FXR1P51114 621 aaKnown RBP eCLIP13.64□□□□□ -0.233e-6■■□□□ 12.2
UBR4-203ENST00000375225 ZNF543Q08ER8 600 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 WHAMMP3Q1A5X7 153 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 FIGNQ5HY92 759 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 ZNF569Q5MCW4 686 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 ZSCAN29Q8IWY8 852 aaPredicted RBP13.64□□□□□ -0.23
UBR4-203ENST00000375225 CCDC170Q8IYT3 715 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 MTMR14Q8NCE2 650 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 LARP4BQ92615 738 aaKnown RBP13.64□□□□□ -0.23
UBR4-203ENST00000375225 WDR24Q96S15 920 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 TUBGCP2Q9BSJ2 902 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 NT5C3AQ9H0P0 336 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 TDRD3Q9H7E2 651 aaKnown RBP13.64□□□□□ -0.23
UBR4-203ENST00000375225 CDC23Q9UJX2 597 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
UBR4-203ENST00000375225 A0A1W2PQJ5 194 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 PP2D1A8MPX8 630 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 ADAMTS3O15072 1205 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 TXKP42681 527 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 DMTNQ08495 405 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 NFIAQ12857 509 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 CCDC96Q2M329 555 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 ZNF662Q6ZS27 426 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 ARHGAP27Q6ZUM4 889 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 DCAF4Q8WV16 495 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 PRMT6Q96LA8 375 aaPredicted RBP13.64□□□□□ -0.23
UBR4-203ENST00000375225 PCMTD1Q96MG8 357 aaPredicted RBP13.64□□□□□ -0.23
UBR4-203ENST00000375225 MTMR9Q96QG7 549 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 DNAJC7Q99615 494 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms