RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 DNM2P50570 870 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 PI16Q6UXB8 463 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 SALL4Q9UJQ4 1053 aa22.74■■□□□ 1.23
TMEFF1-201ENST00000374879 ZPR1O75312 459 aa22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 THEMIS2Q5TEJ8 643 aa22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 CRELD2Q6UXH1 353 aaPredicted RBP22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 CPLX4Q7Z7G2 160 aa22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 PNMA8AQ86V59 439 aaPredicted RBP22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 WHAMMQ8TF30 809 aa22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 CPSF2Q9P2I0 782 aaKnown RBP22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 IFIT3O14879 490 aaKnown RBP22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 RBBP5Q15291 538 aaKnown RBP22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 ANKRD13CQ8N6S4 541 aa22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 P3H4Q92791 437 aa22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 EEF2KMTQ96G04 330 aa22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 PCMTD1Q96MG8 357 aaPredicted RBP22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 ALS2CR12Q96Q35 445 aa22.73■■□□□ 1.23
TMEFF1-201ENST00000374879 HSPA9P38646 679 aaKnown RBP22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 CFAP221Q4G0U5 840 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 ODF2Q5BJF6 829 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 PDXDC2PQ6P474 469 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 NOC3LQ8WTT2 800 aaKnown RBP22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 ACSBG1Q96GR2 724 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 PLCB1Q9NQ66 1216 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 GTPBP6O43824 516 aaPredicted RBP22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 RPN1P04843 607 aaKnown RBP22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 PECAM1P16284 738 aaPredicted RBP22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 EEF1GP26641 437 aaKnown RBP22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 TYW1BQ6NUM6 668 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 BRINP3Q76B58 766 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 KRT12Q99456 494 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 YIPF3Q9GZM5 350 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 HOMER3Q9NSC5 361 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 EXOC1Q9NV70 894 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 SH3BP1Q9Y3L3 701 aa22.72■■□□□ 1.23
TMEFF1-201ENST00000374879 COL5A2P05997 1499 aaPredicted RBP22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 HSD17B3P37058 310 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 ZNF174Q15697 407 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 GPIHBP1Q8IV16 184 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 CCDC63Q8NA47 563 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 TAF1DQ9H5J8 278 aaPredicted RBP22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 ZSWIM5Q9P217 1185 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 TNS2Q63HR2 1409 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 PAPPAQ13219 1627 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 F8W031 263 aaPredicted RBP22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 H0YGN5 161 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 TRIM37O94972 964 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 DEXIO95424 95 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 FERMT2Q96AC1 680 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 SHISA4Q96DD7 197 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 FBXO3Q9UK99 471 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 NFS1Q9Y697 457 aa22.71■■□□□ 1.23
TMEFF1-201ENST00000374879 CCT8L1PA6NM43 557 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 DRD4P21917 467 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 LIFRP42702 1097 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 DNA2P51530 1060 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 PPP2R2AP63151 447 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 SF3A3Q12874 501 aaKnown RBP eCLIP22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 IFIT5Q13325 482 aaKnown RBP22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 KLHDC7AQ5VTJ3 777 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 CRACR2BQ8N4Y2 399 aaPredicted RBP22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 AGAP11Q8TF27 550 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 L3MBTL3Q96JM7 780 aaPredicted RBP22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 PANK4Q9NVE7 773 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 ZNF844Q08AG5 666 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 RTN1Q16799 776 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 ARMC9Q7Z3E5 817 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 TBC1D1Q86TI0 1168 aaPredicted RBP22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 TUBGCP2Q9BSJ2 902 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 UBAC1Q9BSL1 405 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 ARHGAP20Q9P2F6 1191 aa22.7■■□□□ 1.22
TMEFF1-201ENST00000374879 MPHOSPH10O00566 681 aaKnown RBP22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 SSR1P43307 286 aaKnown RBP22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 CDK17Q00537 523 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 LRIG3Q6UXM1 1119 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 ADSSL1Q8N142 457 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 MAGEC2Q9UBF1 373 aaPredicted RBP22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 BUB1O43683 1085 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 DIAPH2O60879 1101 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 PCCAP05165 728 aaPredicted RBP22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 RIPK1Q13546 671 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 UAP1Q16222 522 aaPredicted RBP22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 CHADLQ6NUI6 762 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 RETREG2Q8NC44 543 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 NDST4Q9H3R1 872 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 TMOD3Q9NYL9 352 aa22.69■■□□□ 1.22
TMEFF1-201ENST00000374879 DCDC2CA8MYV0 355 aa22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 PAEPP09466 180 aa22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 KIF11P52732 1056 aa22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 KIF6Q6ZMV9 814 aa22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 TRIM47Q96LD4 638 aa22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 CORO1CQ9ULV4 474 aaPredicted RBP22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 NOVA2Q9UNW9 492 aaKnown RBP22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 ORC4O43929 436 aa22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 RNASE9P60153 205 aaKnown RBP22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 TRIM28Q13263 835 aaKnown RBP22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 MTMR8Q96EF0 704 aa22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 THAP9Q9H5L6 903 aa22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 BSDC1Q9NW68 430 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms