RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 KRT25Q7Z3Z0 450 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 GLIS2Q9BZE0 524 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-203ENST00000374429 DUSP10Q9Y6W6 482 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 BMP15O95972 392 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 MRPL12P52815 198 aaKnown RBP12.06□□□□□ -0.48
CXCL12-203ENST00000374429 GYS2P54840 703 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 FAM83BQ5T0W9 1011 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 CUL5Q93034 780 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 ELMO3Q96BJ8 720 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 TUBGCP2Q9BSJ2 902 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 TCEAL9Q9UHQ7 104 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 PSDA5PKW4 1024 aaPredicted RBP12.06□□□□□ -0.48
CXCL12-203ENST00000374429 SHMT1P34896 483 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 CTTNQ14247 550 aaKnown RBP12.06□□□□□ -0.48
CXCL12-203ENST00000374429 FBXO38Q6PIJ6 1188 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 DDX12PQ92771 950 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 MKRN1Q9UHC7 482 aaKnown RBP12.06□□□□□ -0.48
CXCL12-203ENST00000374429 ATRNO75882 1429 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 TTC26A0AVF1 554 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 PPP1R11O60927 126 aaPredicted RBP12.05□□□□□ -0.48
CXCL12-203ENST00000374429 PLEKP08567 350 aaPredicted RBP12.05□□□□□ -0.48
CXCL12-203ENST00000374429 JAG1P78504 1218 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 NAALADL2Q58DX5 795 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 BANK1Q8NDB2 785 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 CNOT6LQ96LI5 555 aaKnown RBP12.05□□□□□ -0.48
CXCL12-203ENST00000374429 IMPACTQ9P2X3 320 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 LONP1P36776 959 aaKnown RBP12.05□□□□□ -0.48
CXCL12-203ENST00000374429 TCP11X2Q5H9J9 407 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 TMC4Q7Z404 712 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 SLC35F6Q8N357 371 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 GPATCH11Q8N954 259 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 ZNHIT6Q9NWK9 470 aaKnown RBP12.05□□□□□ -0.48
CXCL12-203ENST00000374429 SPATA31A6Q5VVP1 1343 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 ADAMTS7Q9UKP4 1686 aa12.05□□□□□ -0.48
CXCL12-203ENST00000374429 COL14A1Q05707 1796 aaKnown RBP12.05□□□□□ -0.48
CXCL12-203ENST00000374429 MYMKA6NI61 221 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 TMCO5BA8MYB1 307 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 ARHGAP6O43182 974 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 AKR1B10O60218 316 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 MYCLP12524 364 aaPredicted RBP12.04□□□□□ -0.48
CXCL12-203ENST00000374429 CDC25BP30305 580 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 CCDC122Q5T0U0 273 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 RRAGAQ7L523 313 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 GPBP1Q86WP2 473 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 CCDC43Q96MW1 224 aaKnown RBP12.04□□□□□ -0.48
CXCL12-203ENST00000374429 STK32BQ9NY57 414 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 NUP188Q5SRE5 1749 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 BUB1O43683 1085 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 GYPCP04921 128 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 IL1R1P14778 569 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 PPP4CP60510 307 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 ZNF658Q5TYW1 1059 aaPredicted RBP12.04□□□□□ -0.48
CXCL12-203ENST00000374429 PDXDC2PQ6P474 469 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 NSMFQ6X4W1 530 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 CNKSR2Q8WXI2 1034 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 TNFRSF25Q93038 417 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 ZCCHC17Q9NP64 241 aaKnown RBP12.04□□□□□ -0.48
CXCL12-203ENST00000374429 CALCOCO1Q9P1Z2 691 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 PEX10O60683 326 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 ECM1Q16610 540 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 NBPF9Q3BBW0 867 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 WDR78Q5VTH9 848 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 LARP4BQ92615 738 aaKnown RBP12.04□□□□□ -0.48
CXCL12-203ENST00000374429 PURBQ96QR8 312 aaKnown RBP12.04□□□□□ -0.48
CXCL12-203ENST00000374429 RMND1Q9NWS8 449 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 SMARCAL1Q9NZC9 954 aa12.04□□□□□ -0.48
CXCL12-203ENST00000374429 LAMB4A4D0S4 1761 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 USP8P40818 1118 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 PSMC6P62333 389 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 ZNF543Q08ER8 600 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
CXCL12-203ENST00000374429 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
CXCL12-203ENST00000374429 RABEP2Q9H5N1 569 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 PI4KBQ9UBF8 816 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.03□□□□□ -0.48
CXCL12-203ENST00000374429 NDUFB10O96000 172 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 GTF2A1P52655 376 aaPredicted RBP12.03□□□□□ -0.48
CXCL12-203ENST00000374429 NR1I3Q14994 352 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 SAMD7Q7Z3H4 446 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 AKT1S1Q96B36 256 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 FGFBP2Q9BYJ0 223 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 TRIM9Q9C026 710 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 PSMD14O00487 310 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 PRPF6O94906 941 aaKnown RBP12.03□□□□□ -0.48
CXCL12-203ENST00000374429 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
CXCL12-203ENST00000374429 ALAS1P13196 640 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 SARSP49591 514 aaKnown RBP12.03□□□□□ -0.48
CXCL12-203ENST00000374429 RAPGEF1Q13905 1077 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 TICAM2Q86XR7 235 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 CRAMP1Q96RY5 1269 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 RAB34Q9BZG1 259 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 DNAJC18Q9H819 358 aa12.03□□□□□ -0.48
CXCL12-203ENST00000374429 ADD3Q9UEY8 706 aaKnown RBP12.03□□□□□ -0.48
CXCL12-203ENST00000374429 PNMA6AP0CW24 399 aaPredicted RBP12.02□□□□□ -0.48
CXCL12-203ENST00000374429 PPP2R3AQ06190 1150 aa12.02□□□□□ -0.48
CXCL12-203ENST00000374429 SLC27A3Q5K4L6 730 aa12.02□□□□□ -0.48
CXCL12-203ENST00000374429 FBXO11Q86XK2 927 aa12.02□□□□□ -0.48
CXCL12-203ENST00000374429 ZMYND12Q9H0C1 365 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms